Gene : AUR62002803 C. quinoa v1.0
Defline:  (1 of 3) K01873 - valyl-tRNA synthetase (VARS, valS) Genomic Order:  155
Name:  ? AUR62002803 Secondary Identifier:  ? PAC:36301882
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62002803 0.5kb upstream 0.5kb upstream 25529 true C_Quinoa_Scaffold_1000: 11226197-11251725 Chenopodium quinoa
AUR62002803 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1000: 11226197-11226696 Chenopodium quinoa
AUR62002803 0.5kb downstream 0.5kb downstream 25529 true C_Quinoa_Scaffold_1000: 11226697-11252225 Chenopodium quinoa
AUR62002803 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1000: 11251726-11252225 Chenopodium quinoa
AUR62002803 1.0kb upstream 1.0kb upstream 26029 true C_Quinoa_Scaffold_1000: 11225697-11251725 Chenopodium quinoa
AUR62002803 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1000: 11225697-11226696 Chenopodium quinoa
AUR62002803 1.0kb downstream 1.0kb downstream 26029 true C_Quinoa_Scaffold_1000: 11226697-11252725 Chenopodium quinoa
AUR62002803 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1000: 11251726-11252725 Chenopodium quinoa
AUR62002803 2.0kb upstream 2.0kb upstream 27029 true C_Quinoa_Scaffold_1000: 11224697-11251725 Chenopodium quinoa
AUR62002803 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1000: 11224697-11226696 Chenopodium quinoa
AUR62002803 2.0kb downstream 2.0kb downstream 27029 true C_Quinoa_Scaffold_1000: 11226697-11253725 Chenopodium quinoa
AUR62002803 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1000: 11251726-11253725 Chenopodium quinoa
AUR62002803 5.0kb upstream 5.0kb upstream 30029 true C_Quinoa_Scaffold_1000: 11221697-11251725 Chenopodium quinoa
AUR62002803 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1000: 11221697-11226696 Chenopodium quinoa
AUR62002803 5.0kb downstream 5.0kb downstream 30029 true C_Quinoa_Scaffold_1000: 11226697-11256725 Chenopodium quinoa
AUR62002803 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1000: 11251726-11256725 Chenopodium quinoa
AUR62002803 10.0kb upstream 10.0kb upstream 35029 true C_Quinoa_Scaffold_1000: 11216697-11251725 Chenopodium quinoa
AUR62002803 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1000: 11216697-11226696 Chenopodium quinoa
AUR62002803 10.0kb downstream 10.0kb downstream 35029 true C_Quinoa_Scaffold_1000: 11226697-11261725 Chenopodium quinoa
AUR62002803 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1000: 11251726-11261725 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain