Gene : AUR62002845 C. quinoa v1.0
Defline:  (1 of 4) K01883 - cysteinyl-tRNA synthetase (CARS, cysS) Genomic Order:  197
Name:  ? AUR62002845 Secondary Identifier:  ? PAC:36301719
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62002845 0.5kb upstream 0.5kb upstream 10234 true C_Quinoa_Scaffold_1000: 13067736-13077969 Chenopodium quinoa
AUR62002845 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1000: 13077470-13077969 Chenopodium quinoa
AUR62002845 0.5kb downstream 0.5kb downstream 10234 true C_Quinoa_Scaffold_1000: 13067236-13077469 Chenopodium quinoa
AUR62002845 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1000: 13067236-13067735 Chenopodium quinoa
AUR62002845 1.0kb upstream 1.0kb upstream 10734 true C_Quinoa_Scaffold_1000: 13067736-13078469 Chenopodium quinoa
AUR62002845 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1000: 13077470-13078469 Chenopodium quinoa
AUR62002845 1.0kb downstream 1.0kb downstream 10734 true C_Quinoa_Scaffold_1000: 13066736-13077469 Chenopodium quinoa
AUR62002845 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1000: 13066736-13067735 Chenopodium quinoa
AUR62002845 2.0kb upstream 2.0kb upstream 11734 true C_Quinoa_Scaffold_1000: 13067736-13079469 Chenopodium quinoa
AUR62002845 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1000: 13077470-13079469 Chenopodium quinoa
AUR62002845 2.0kb downstream 2.0kb downstream 11734 true C_Quinoa_Scaffold_1000: 13065736-13077469 Chenopodium quinoa
AUR62002845 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1000: 13065736-13067735 Chenopodium quinoa
AUR62002845 5.0kb upstream 5.0kb upstream 14734 true C_Quinoa_Scaffold_1000: 13067736-13082469 Chenopodium quinoa
AUR62002845 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1000: 13077470-13082469 Chenopodium quinoa
AUR62002845 5.0kb downstream 5.0kb downstream 14734 true C_Quinoa_Scaffold_1000: 13062736-13077469 Chenopodium quinoa
AUR62002845 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1000: 13062736-13067735 Chenopodium quinoa
AUR62002845 10.0kb upstream 10.0kb upstream 19734 true C_Quinoa_Scaffold_1000: 13067736-13087469 Chenopodium quinoa
AUR62002845 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1000: 13077470-13087469 Chenopodium quinoa
AUR62002845 10.0kb downstream 10.0kb downstream 19734 true C_Quinoa_Scaffold_1000: 13057736-13077469 Chenopodium quinoa
AUR62002845 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1000: 13057736-13067735 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123736819 5271 Pentapetalae View MSA
122791424 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain