Gene : AUR62003370 C. quinoa v1.0

Defline:  (1 of 2) K08874 - transformation/transcription domain-associated protein (TRRAP) Genomic Order:  722
Name:  ? AUR62003370 Secondary Identifier:  ? PAC:36301575

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62003370 0.5kb upstream 0.5kb upstream 29383 true C_Quinoa_Scaffold_1000: 23457141-23486523 Chenopodium quinoa
AUR62003370 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1000: 23486024-23486523 Chenopodium quinoa
AUR62003370 0.5kb downstream 0.5kb downstream 29383 true C_Quinoa_Scaffold_1000: 23456641-23486023 Chenopodium quinoa
AUR62003370 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1000: 23456641-23457140 Chenopodium quinoa
AUR62003370 1.0kb upstream 1.0kb upstream 29883 true C_Quinoa_Scaffold_1000: 23457141-23487023 Chenopodium quinoa
AUR62003370 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1000: 23486024-23487023 Chenopodium quinoa
AUR62003370 1.0kb downstream 1.0kb downstream 29883 true C_Quinoa_Scaffold_1000: 23456141-23486023 Chenopodium quinoa
AUR62003370 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1000: 23456141-23457140 Chenopodium quinoa
AUR62003370 2.0kb upstream 2.0kb upstream 30883 true C_Quinoa_Scaffold_1000: 23457141-23488023 Chenopodium quinoa
AUR62003370 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1000: 23486024-23488023 Chenopodium quinoa
AUR62003370 2.0kb downstream 2.0kb downstream 30883 true C_Quinoa_Scaffold_1000: 23455141-23486023 Chenopodium quinoa
AUR62003370 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1000: 23455141-23457140 Chenopodium quinoa
AUR62003370 5.0kb upstream 5.0kb upstream 33883 true C_Quinoa_Scaffold_1000: 23457141-23491023 Chenopodium quinoa
AUR62003370 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1000: 23486024-23491023 Chenopodium quinoa
AUR62003370 5.0kb downstream 5.0kb downstream 33883 true C_Quinoa_Scaffold_1000: 23452141-23486023 Chenopodium quinoa
AUR62003370 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1000: 23452141-23457140 Chenopodium quinoa
AUR62003370 10.0kb upstream 10.0kb upstream 38883 true C_Quinoa_Scaffold_1000: 23457141-23496023 Chenopodium quinoa
AUR62003370 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1000: 23486024-23496023 Chenopodium quinoa
AUR62003370 10.0kb downstream 10.0kb downstream 38883 true C_Quinoa_Scaffold_1000: 23447141-23486023 Chenopodium quinoa
AUR62003370 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1000: 23447141-23457140 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027431 5273 Angiosperm View MSA
123737923 5271 Pentapetalae View MSA
122791578 5272 Eudicot View MSA
121344769 5274 Embryophyte View MSA
123424018 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain