Protein Domain : IPR013840

Type:  Domain Name:  NAD-dependent DNA ligase, N-terminal
Description:  DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalyzing the formation of an internucleotide ester bond between phosphate and deoxyribose. It is active during DNA replication, DNA repair and DNA recombination. There are two forms of DNA ligase: one requires ATP (), the other NAD ().This entry represents the N-terminal region of NAD-dependent bacterial DNA ligases. They are proteins of about 75 to 85 Kd whose sequence is well conserved [, ]. They also show similarity to yicF, an Escherichia colihypothetical protein of 63 Kd. The region described by this model covers the adenylation, OB-fold and zinc-finger domains of these enzymes [, ]. Short Name:  DNAligase_N

0 Child Features

4 Contains

DB identifier Type Name
IPR004149 Domain Zinc-finger, NAD-dependent DNA ligase C4-type
IPR004150 Domain NAD-dependent DNA ligase, OB-fold
IPR013839 Domain NAD-dependent DNA ligase, adenylation
IPR018239 Active_site NAD-dependent DNA ligase, active site

1 Cross References

Identifier
SM00532

2 Found Ins

DB identifier Type Name
IPR001679 Family NAD-dependent DNA ligase
IPR020923 Family DNA ligase B

1 GO Annotation

GO Term Gene Name
GO:0003911 IPR013840

1 Ontology Annotations

GO Term Gene Name
GO:0003911 IPR013840

0 Parent Features

14 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
179233 PAC:27341052 Micromonas pusilla CCMP1545 764  
Cre06.g294200.t1.1 A0A2K3DQM5 PAC:30779211 Chlamydomonas reinhardtii 966  
Dusal.0194s00007.1.p PAC:33199919 Dunaliella salina 959  
Pum0027s0115.1.p A0A1X6PJS6 PAC:38017269 Porphyra umbilicalis 780  
Bobra.0102s0036.1.p PAC:40719721 Botryococcus braunii 735  
CepurR40.6G224300.1.p PAC:43012771 Ceratodon purpureus R40 163  
CepurR40.6G226700.1.p PAC:43012646 Ceratodon purpureus R40 210  
CepurR40.6G223800.1.p PAC:43012609 Ceratodon purpureus R40 163  
CepurR40.8G039100.1.p PAC:42991862 Ceratodon purpureus R40 178  
CepurR40.12G127600.1.p PAC:43016316 Ceratodon purpureus R40 1027  
CepurR40.VG000300.1.p PAC:43021827 Ceratodon purpureus R40 210  
CepurGG1.UG214000.1.p PAC:43053623 Ceratodon purpureus GG1 189  
CepurGG1.12G130300.1.p PAC:43054223 Ceratodon purpureus GG1 1027  
Vocar.0024s0125.1.p PAC:32890371 Volvox carteri 1128  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1526462
            8390989
            10698952
            10368271