Gene : AUR62032525 C. quinoa v1.0
Defline:  (1 of 2) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL) Genomic Order:  76
Name:  ? AUR62032525 Secondary Identifier:  ? PAC:36303578
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa CALVIN-PWY Chenopodium quinoa pathologic  
Cquinoa PHOTOALL-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-5723 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62032525 0.5kb upstream 0.5kb upstream 37639 true C_Quinoa_Scaffold_1105: 5934442-5972080 Chenopodium quinoa
AUR62032525 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1105: 5934442-5934941 Chenopodium quinoa
AUR62032525 0.5kb downstream 0.5kb downstream 37639 true C_Quinoa_Scaffold_1105: 5934942-5972580 Chenopodium quinoa
AUR62032525 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1105: 5972081-5972580 Chenopodium quinoa
AUR62032525 1.0kb upstream 1.0kb upstream 38139 true C_Quinoa_Scaffold_1105: 5933942-5972080 Chenopodium quinoa
AUR62032525 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1105: 5933942-5934941 Chenopodium quinoa
AUR62032525 1.0kb downstream 1.0kb downstream 38139 true C_Quinoa_Scaffold_1105: 5934942-5973080 Chenopodium quinoa
AUR62032525 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1105: 5972081-5973080 Chenopodium quinoa
AUR62032525 2.0kb upstream 2.0kb upstream 39139 true C_Quinoa_Scaffold_1105: 5932942-5972080 Chenopodium quinoa
AUR62032525 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1105: 5932942-5934941 Chenopodium quinoa
AUR62032525 2.0kb downstream 2.0kb downstream 39139 true C_Quinoa_Scaffold_1105: 5934942-5974080 Chenopodium quinoa
AUR62032525 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1105: 5972081-5974080 Chenopodium quinoa
AUR62032525 5.0kb upstream 5.0kb upstream 42139 true C_Quinoa_Scaffold_1105: 5929942-5972080 Chenopodium quinoa
AUR62032525 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1105: 5929942-5934941 Chenopodium quinoa
AUR62032525 5.0kb downstream 5.0kb downstream 42139 true C_Quinoa_Scaffold_1105: 5934942-5977080 Chenopodium quinoa
AUR62032525 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1105: 5972081-5977080 Chenopodium quinoa
AUR62032525 10.0kb upstream 10.0kb upstream 47139 true C_Quinoa_Scaffold_1105: 5924942-5972080 Chenopodium quinoa
AUR62032525 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1105: 5924942-5934941 Chenopodium quinoa
AUR62032525 10.0kb downstream 10.0kb downstream 47139 true C_Quinoa_Scaffold_1105: 5934942-5982080 Chenopodium quinoa
AUR62032525 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1105: 5972081-5982080 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123751247 5271 Pentapetalae View MSA
122773961 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain