Gene : AUR62017990 C. quinoa v1.0
Defline:  (1 of 5) K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Genomic Order:  225
Name:  ? AUR62017990 Secondary Identifier:  ? PAC:36321393
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7560 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62017990 0.5kb upstream 0.5kb upstream 4328 true C_Quinoa_Scaffold_3086: 2518977-2523304 Chenopodium quinoa
AUR62017990 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3086: 2522805-2523304 Chenopodium quinoa
AUR62017990 0.5kb downstream 0.5kb downstream 4328 true C_Quinoa_Scaffold_3086: 2518477-2522804 Chenopodium quinoa
AUR62017990 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3086: 2518477-2518976 Chenopodium quinoa
AUR62017990 1.0kb upstream 1.0kb upstream 4828 true C_Quinoa_Scaffold_3086: 2518977-2523804 Chenopodium quinoa
AUR62017990 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3086: 2522805-2523804 Chenopodium quinoa
AUR62017990 1.0kb downstream 1.0kb downstream 4828 true C_Quinoa_Scaffold_3086: 2517977-2522804 Chenopodium quinoa
AUR62017990 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3086: 2517977-2518976 Chenopodium quinoa
AUR62017990 2.0kb upstream 2.0kb upstream 5828 true C_Quinoa_Scaffold_3086: 2518977-2524804 Chenopodium quinoa
AUR62017990 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3086: 2522805-2524804 Chenopodium quinoa
AUR62017990 2.0kb downstream 2.0kb downstream 5828 true C_Quinoa_Scaffold_3086: 2516977-2522804 Chenopodium quinoa
AUR62017990 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3086: 2516977-2518976 Chenopodium quinoa
AUR62017990 5.0kb upstream 5.0kb upstream 8828 true C_Quinoa_Scaffold_3086: 2518977-2527804 Chenopodium quinoa
AUR62017990 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3086: 2522805-2527804 Chenopodium quinoa
AUR62017990 5.0kb downstream 5.0kb downstream 8828 true C_Quinoa_Scaffold_3086: 2513977-2522804 Chenopodium quinoa
AUR62017990 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3086: 2513977-2518976 Chenopodium quinoa
AUR62017990 10.0kb upstream 10.0kb upstream 13828 true C_Quinoa_Scaffold_3086: 2518977-2532804 Chenopodium quinoa
AUR62017990 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3086: 2522805-2532804 Chenopodium quinoa
AUR62017990 10.0kb downstream 10.0kb downstream 13828 true C_Quinoa_Scaffold_3086: 2508977-2522804 Chenopodium quinoa
AUR62017990 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3086: 2508977-2518976 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123742318 5271 Pentapetalae View MSA
122794630 5272 Eudicot View MSA
122048955 5273 Angiosperm View MSA
121351194 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain