Gene : AUR62019409 C. quinoa v1.0
Defline:  (1 of 6) K00703 - starch synthase (E2.4.1.21, glgA) Genomic Order:  248
Name:  ? AUR62019409 Secondary Identifier:  ? PAC:36286241
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa GLYCOGENSYNTH-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-622 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62019409 0.5kb upstream 0.5kb upstream 7301 true C_Quinoa_Scaffold_3107: 3078171-3085471 Chenopodium quinoa
AUR62019409 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3107: 3078171-3078670 Chenopodium quinoa
AUR62019409 0.5kb downstream 0.5kb downstream 7301 true C_Quinoa_Scaffold_3107: 3078671-3085971 Chenopodium quinoa
AUR62019409 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3107: 3085472-3085971 Chenopodium quinoa
AUR62019409 1.0kb upstream 1.0kb upstream 7801 true C_Quinoa_Scaffold_3107: 3077671-3085471 Chenopodium quinoa
AUR62019409 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3107: 3077671-3078670 Chenopodium quinoa
AUR62019409 1.0kb downstream 1.0kb downstream 7801 true C_Quinoa_Scaffold_3107: 3078671-3086471 Chenopodium quinoa
AUR62019409 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3107: 3085472-3086471 Chenopodium quinoa
AUR62019409 2.0kb upstream 2.0kb upstream 8801 true C_Quinoa_Scaffold_3107: 3076671-3085471 Chenopodium quinoa
AUR62019409 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3107: 3076671-3078670 Chenopodium quinoa
AUR62019409 2.0kb downstream 2.0kb downstream 8801 true C_Quinoa_Scaffold_3107: 3078671-3087471 Chenopodium quinoa
AUR62019409 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3107: 3085472-3087471 Chenopodium quinoa
AUR62019409 5.0kb upstream 5.0kb upstream 11801 true C_Quinoa_Scaffold_3107: 3073671-3085471 Chenopodium quinoa
AUR62019409 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3107: 3073671-3078670 Chenopodium quinoa
AUR62019409 5.0kb downstream 5.0kb downstream 11801 true C_Quinoa_Scaffold_3107: 3078671-3090471 Chenopodium quinoa
AUR62019409 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3107: 3085472-3090471 Chenopodium quinoa
AUR62019409 10.0kb upstream 10.0kb upstream 16801 true C_Quinoa_Scaffold_3107: 3068671-3085471 Chenopodium quinoa
AUR62019409 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3107: 3068671-3078670 Chenopodium quinoa
AUR62019409 10.0kb downstream 10.0kb downstream 16801 true C_Quinoa_Scaffold_3107: 3078671-3095471 Chenopodium quinoa
AUR62019409 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3107: 3085472-3095471 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123737274 5271 Pentapetalae View MSA
122791286 5272 Eudicot View MSA
122042634 5273 Angiosperm View MSA
121343835 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain