Gene : AUR62019248 C. quinoa v1.0
Defline:  (1 of 9) K00454 - lipoxygenase (LOX2S) Genomic Order:  87
Name:  ? AUR62019248 Secondary Identifier:  ? PAC:36286133
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5409 Chenopodium quinoa pathologic  
Cquinoa PWY-735 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62019248 0.5kb upstream 0.5kb upstream 6832 true C_Quinoa_Scaffold_3107: 1016034-1022865 Chenopodium quinoa
AUR62019248 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3107: 1022366-1022865 Chenopodium quinoa
AUR62019248 0.5kb downstream 0.5kb downstream 6832 true C_Quinoa_Scaffold_3107: 1015534-1022365 Chenopodium quinoa
AUR62019248 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3107: 1015534-1016033 Chenopodium quinoa
AUR62019248 1.0kb upstream 1.0kb upstream 7332 true C_Quinoa_Scaffold_3107: 1016034-1023365 Chenopodium quinoa
AUR62019248 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3107: 1022366-1023365 Chenopodium quinoa
AUR62019248 1.0kb downstream 1.0kb downstream 7332 true C_Quinoa_Scaffold_3107: 1015034-1022365 Chenopodium quinoa
AUR62019248 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3107: 1015034-1016033 Chenopodium quinoa
AUR62019248 2.0kb upstream 2.0kb upstream 8332 true C_Quinoa_Scaffold_3107: 1016034-1024365 Chenopodium quinoa
AUR62019248 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3107: 1022366-1024365 Chenopodium quinoa
AUR62019248 2.0kb downstream 2.0kb downstream 8332 true C_Quinoa_Scaffold_3107: 1014034-1022365 Chenopodium quinoa
AUR62019248 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3107: 1014034-1016033 Chenopodium quinoa
AUR62019248 5.0kb upstream 5.0kb upstream 11332 true C_Quinoa_Scaffold_3107: 1016034-1027365 Chenopodium quinoa
AUR62019248 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3107: 1022366-1027365 Chenopodium quinoa
AUR62019248 5.0kb downstream 5.0kb downstream 11332 true C_Quinoa_Scaffold_3107: 1011034-1022365 Chenopodium quinoa
AUR62019248 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3107: 1011034-1016033 Chenopodium quinoa
AUR62019248 10.0kb upstream 10.0kb upstream 16332 true C_Quinoa_Scaffold_3107: 1016034-1032365 Chenopodium quinoa
AUR62019248 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3107: 1022366-1032365 Chenopodium quinoa
AUR62019248 10.0kb downstream 10.0kb downstream 16332 true C_Quinoa_Scaffold_3107: 1006034-1022365 Chenopodium quinoa
AUR62019248 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3107: 1006034-1016033 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123743667 5271 Pentapetalae View MSA
122789767 5272 Eudicot View MSA
122043119 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain