Gene : AUR62013640 C. quinoa v1.0

Defline:  (1 of 44) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  40
Name:  ? AUR62013640 Secondary Identifier:  ? PAC:36307243

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62013640 0.5kb upstream 0.5kb upstream 2117 true C_Quinoa_Scaffold_1412: 439591-441707 Chenopodium quinoa
AUR62013640 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1412: 439591-440090 Chenopodium quinoa
AUR62013640 0.5kb downstream 0.5kb downstream 2117 true C_Quinoa_Scaffold_1412: 440091-442207 Chenopodium quinoa
AUR62013640 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1412: 441708-442207 Chenopodium quinoa
AUR62013640 1.0kb upstream 1.0kb upstream 2617 true C_Quinoa_Scaffold_1412: 439091-441707 Chenopodium quinoa
AUR62013640 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1412: 439091-440090 Chenopodium quinoa
AUR62013640 1.0kb downstream 1.0kb downstream 2617 true C_Quinoa_Scaffold_1412: 440091-442707 Chenopodium quinoa
AUR62013640 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1412: 441708-442707 Chenopodium quinoa
AUR62013640 2.0kb upstream 2.0kb upstream 3617 true C_Quinoa_Scaffold_1412: 438091-441707 Chenopodium quinoa
AUR62013640 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1412: 438091-440090 Chenopodium quinoa
AUR62013640 2.0kb downstream 2.0kb downstream 3617 true C_Quinoa_Scaffold_1412: 440091-443707 Chenopodium quinoa
AUR62013640 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1412: 441708-443707 Chenopodium quinoa
AUR62013640 5.0kb upstream 5.0kb upstream 6617 true C_Quinoa_Scaffold_1412: 435091-441707 Chenopodium quinoa
AUR62013640 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1412: 435091-440090 Chenopodium quinoa
AUR62013640 5.0kb downstream 5.0kb downstream 6617 true C_Quinoa_Scaffold_1412: 440091-446707 Chenopodium quinoa
AUR62013640 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1412: 441708-446707 Chenopodium quinoa
AUR62013640 10.0kb upstream 10.0kb upstream 11617 true C_Quinoa_Scaffold_1412: 430091-441707 Chenopodium quinoa
AUR62013640 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1412: 430091-440090 Chenopodium quinoa
AUR62013640 10.0kb downstream 10.0kb downstream 11617 true C_Quinoa_Scaffold_1412: 440091-451707 Chenopodium quinoa
AUR62013640 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1412: 441708-451707 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123743888 5271 Pentapetalae View MSA
122795257 5272 Eudicot View MSA
122048677 5273 Angiosperm View MSA
121311068 5274 Embryophyte View MSA
123348417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain