Gene : AUR62013650 C. quinoa v1.0
Defline:  (1 of 2) K00800 - 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) Genomic Order:  50
Name:  ? AUR62013650 Secondary Identifier:  ? PAC:36307098
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa ARO-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-6163 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62013650 0.5kb upstream 0.5kb upstream 7418 true C_Quinoa_Scaffold_1412: 505581-512998 Chenopodium quinoa
AUR62013650 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1412: 512499-512998 Chenopodium quinoa
AUR62013650 0.5kb downstream 0.5kb downstream 7418 true C_Quinoa_Scaffold_1412: 505081-512498 Chenopodium quinoa
AUR62013650 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1412: 505081-505580 Chenopodium quinoa
AUR62013650 1.0kb upstream 1.0kb upstream 7918 true C_Quinoa_Scaffold_1412: 505581-513498 Chenopodium quinoa
AUR62013650 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1412: 512499-513498 Chenopodium quinoa
AUR62013650 1.0kb downstream 1.0kb downstream 7918 true C_Quinoa_Scaffold_1412: 504581-512498 Chenopodium quinoa
AUR62013650 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1412: 504581-505580 Chenopodium quinoa
AUR62013650 2.0kb upstream 2.0kb upstream 8918 true C_Quinoa_Scaffold_1412: 505581-514498 Chenopodium quinoa
AUR62013650 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1412: 512499-514498 Chenopodium quinoa
AUR62013650 2.0kb downstream 2.0kb downstream 8918 true C_Quinoa_Scaffold_1412: 503581-512498 Chenopodium quinoa
AUR62013650 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1412: 503581-505580 Chenopodium quinoa
AUR62013650 5.0kb upstream 5.0kb upstream 11918 true C_Quinoa_Scaffold_1412: 505581-517498 Chenopodium quinoa
AUR62013650 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1412: 512499-517498 Chenopodium quinoa
AUR62013650 5.0kb downstream 5.0kb downstream 11918 true C_Quinoa_Scaffold_1412: 500581-512498 Chenopodium quinoa
AUR62013650 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1412: 500581-505580 Chenopodium quinoa
AUR62013650 10.0kb upstream 10.0kb upstream 16918 true C_Quinoa_Scaffold_1412: 505581-522498 Chenopodium quinoa
AUR62013650 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1412: 512499-522498 Chenopodium quinoa
AUR62013650 10.0kb downstream 10.0kb downstream 16918 true C_Quinoa_Scaffold_1412: 495581-512498 Chenopodium quinoa
AUR62013650 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1412: 495581-505580 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123738347 5271 Pentapetalae View MSA
122792138 5272 Eudicot View MSA
122041964 5273 Angiosperm View MSA
121345789 5274 Embryophyte View MSA
123424749 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain