Gene : AUR62013696 C. quinoa v1.0
Defline:  (1 of 2) PTHR23163//PTHR23163:SF3 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  96
Name:  ? AUR62013696 Secondary Identifier:  ? PAC:36307321
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7511 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62013696 0.5kb upstream 0.5kb upstream 14331 true C_Quinoa_Scaffold_1412: 1024087-1038417 Chenopodium quinoa
AUR62013696 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1412: 1037918-1038417 Chenopodium quinoa
AUR62013696 0.5kb downstream 0.5kb downstream 14331 true C_Quinoa_Scaffold_1412: 1023587-1037917 Chenopodium quinoa
AUR62013696 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1412: 1023587-1024086 Chenopodium quinoa
AUR62013696 1.0kb upstream 1.0kb upstream 14831 true C_Quinoa_Scaffold_1412: 1024087-1038917 Chenopodium quinoa
AUR62013696 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1412: 1037918-1038917 Chenopodium quinoa
AUR62013696 1.0kb downstream 1.0kb downstream 14831 true C_Quinoa_Scaffold_1412: 1023087-1037917 Chenopodium quinoa
AUR62013696 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1412: 1023087-1024086 Chenopodium quinoa
AUR62013696 2.0kb upstream 2.0kb upstream 15831 true C_Quinoa_Scaffold_1412: 1024087-1039917 Chenopodium quinoa
AUR62013696 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1412: 1037918-1039917 Chenopodium quinoa
AUR62013696 2.0kb downstream 2.0kb downstream 15831 true C_Quinoa_Scaffold_1412: 1022087-1037917 Chenopodium quinoa
AUR62013696 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1412: 1022087-1024086 Chenopodium quinoa
AUR62013696 5.0kb upstream 5.0kb upstream 18831 true C_Quinoa_Scaffold_1412: 1024087-1042917 Chenopodium quinoa
AUR62013696 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1412: 1037918-1042917 Chenopodium quinoa
AUR62013696 5.0kb downstream 5.0kb downstream 18831 true C_Quinoa_Scaffold_1412: 1019087-1037917 Chenopodium quinoa
AUR62013696 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1412: 1019087-1024086 Chenopodium quinoa
AUR62013696 10.0kb upstream 10.0kb upstream 23831 true C_Quinoa_Scaffold_1412: 1024087-1047917 Chenopodium quinoa
AUR62013696 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1412: 1037918-1047917 Chenopodium quinoa
AUR62013696 10.0kb downstream 10.0kb downstream 23831 true C_Quinoa_Scaffold_1412: 1014087-1037917 Chenopodium quinoa
AUR62013696 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1412: 1014087-1024086 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain