Gene : AUR62040470 C. quinoa v1.0

Defline:  (1 of 37) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  24
Name:  ? AUR62040470 Secondary Identifier:  ? PAC:36316878

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62040470 0.5kb upstream 0.5kb upstream 3842 true C_Quinoa_Scaffold_3293: 1274287-1278128 Chenopodium quinoa
AUR62040470 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3293: 1274287-1274786 Chenopodium quinoa
AUR62040470 0.5kb downstream 0.5kb downstream 3842 true C_Quinoa_Scaffold_3293: 1274787-1278628 Chenopodium quinoa
AUR62040470 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3293: 1278129-1278628 Chenopodium quinoa
AUR62040470 1.0kb upstream 1.0kb upstream 4342 true C_Quinoa_Scaffold_3293: 1273787-1278128 Chenopodium quinoa
AUR62040470 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3293: 1273787-1274786 Chenopodium quinoa
AUR62040470 1.0kb downstream 1.0kb downstream 4342 true C_Quinoa_Scaffold_3293: 1274787-1279128 Chenopodium quinoa
AUR62040470 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3293: 1278129-1279128 Chenopodium quinoa
AUR62040470 2.0kb upstream 2.0kb upstream 5342 true C_Quinoa_Scaffold_3293: 1272787-1278128 Chenopodium quinoa
AUR62040470 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3293: 1272787-1274786 Chenopodium quinoa
AUR62040470 2.0kb downstream 2.0kb downstream 5342 true C_Quinoa_Scaffold_3293: 1274787-1280128 Chenopodium quinoa
AUR62040470 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3293: 1278129-1280128 Chenopodium quinoa
AUR62040470 5.0kb upstream 5.0kb upstream 8342 true C_Quinoa_Scaffold_3293: 1269787-1278128 Chenopodium quinoa
AUR62040470 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3293: 1269787-1274786 Chenopodium quinoa
AUR62040470 5.0kb downstream 5.0kb downstream 8342 true C_Quinoa_Scaffold_3293: 1274787-1283128 Chenopodium quinoa
AUR62040470 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3293: 1278129-1283128 Chenopodium quinoa
AUR62040470 10.0kb upstream 10.0kb upstream 13342 true C_Quinoa_Scaffold_3293: 1264787-1278128 Chenopodium quinoa
AUR62040470 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3293: 1264787-1274786 Chenopodium quinoa
AUR62040470 10.0kb downstream 10.0kb downstream 13342 true C_Quinoa_Scaffold_3293: 1274787-1288128 Chenopodium quinoa
AUR62040470 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3293: 1278129-1288128 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
123752208 5271 Pentapetalae View MSA
122797685 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain