Gene : AUR62012231 C. quinoa v1.0
Defline:  (1 of 3) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  150
Name:  ? AUR62012231 Secondary Identifier:  ? PAC:36280506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62012231 0.5kb upstream 0.5kb upstream 9346 true C_Quinoa_Scaffold_1995: 2138701-2148046 Chenopodium quinoa
AUR62012231 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1995: 2138701-2139200 Chenopodium quinoa
AUR62012231 0.5kb downstream 0.5kb downstream 9346 true C_Quinoa_Scaffold_1995: 2139201-2148546 Chenopodium quinoa
AUR62012231 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1995: 2148047-2148546 Chenopodium quinoa
AUR62012231 1.0kb upstream 1.0kb upstream 9846 true C_Quinoa_Scaffold_1995: 2138201-2148046 Chenopodium quinoa
AUR62012231 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1995: 2138201-2139200 Chenopodium quinoa
AUR62012231 1.0kb downstream 1.0kb downstream 9846 true C_Quinoa_Scaffold_1995: 2139201-2149046 Chenopodium quinoa
AUR62012231 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1995: 2148047-2149046 Chenopodium quinoa
AUR62012231 2.0kb upstream 2.0kb upstream 10846 true C_Quinoa_Scaffold_1995: 2137201-2148046 Chenopodium quinoa
AUR62012231 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1995: 2137201-2139200 Chenopodium quinoa
AUR62012231 2.0kb downstream 2.0kb downstream 10846 true C_Quinoa_Scaffold_1995: 2139201-2150046 Chenopodium quinoa
AUR62012231 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1995: 2148047-2150046 Chenopodium quinoa
AUR62012231 5.0kb upstream 5.0kb upstream 13846 true C_Quinoa_Scaffold_1995: 2134201-2148046 Chenopodium quinoa
AUR62012231 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1995: 2134201-2139200 Chenopodium quinoa
AUR62012231 5.0kb downstream 5.0kb downstream 13846 true C_Quinoa_Scaffold_1995: 2139201-2153046 Chenopodium quinoa
AUR62012231 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1995: 2148047-2153046 Chenopodium quinoa
AUR62012231 10.0kb upstream 10.0kb upstream 18846 true C_Quinoa_Scaffold_1995: 2129201-2148046 Chenopodium quinoa
AUR62012231 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1995: 2129201-2139200 Chenopodium quinoa
AUR62012231 10.0kb downstream 10.0kb downstream 18846 true C_Quinoa_Scaffold_1995: 2139201-2158046 Chenopodium quinoa
AUR62012231 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1995: 2148047-2158046 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739814 5271 Pentapetalae View MSA
122788407 5272 Eudicot View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain