Gene : AUR62011866 C. quinoa v1.0
Defline:  (1 of 2) PTHR11778//PTHR11778:SF7 - SERYL-TRNA SYNTHETASE // SERINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  177
Name:  ? AUR62011866 Secondary Identifier:  ? PAC:36311315
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62011866 0.5kb upstream 0.5kb upstream 5047 true C_Quinoa_Scaffold_2008: 2025046-2030092 Chenopodium quinoa
AUR62011866 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2008: 2025046-2025545 Chenopodium quinoa
AUR62011866 0.5kb downstream 0.5kb downstream 5047 true C_Quinoa_Scaffold_2008: 2025546-2030592 Chenopodium quinoa
AUR62011866 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2008: 2030093-2030592 Chenopodium quinoa
AUR62011866 1.0kb upstream 1.0kb upstream 5547 true C_Quinoa_Scaffold_2008: 2024546-2030092 Chenopodium quinoa
AUR62011866 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2008: 2024546-2025545 Chenopodium quinoa
AUR62011866 1.0kb downstream 1.0kb downstream 5547 true C_Quinoa_Scaffold_2008: 2025546-2031092 Chenopodium quinoa
AUR62011866 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2008: 2030093-2031092 Chenopodium quinoa
AUR62011866 2.0kb upstream 2.0kb upstream 6547 true C_Quinoa_Scaffold_2008: 2023546-2030092 Chenopodium quinoa
AUR62011866 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2008: 2023546-2025545 Chenopodium quinoa
AUR62011866 2.0kb downstream 2.0kb downstream 6547 true C_Quinoa_Scaffold_2008: 2025546-2032092 Chenopodium quinoa
AUR62011866 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2008: 2030093-2032092 Chenopodium quinoa
AUR62011866 5.0kb upstream 5.0kb upstream 9547 true C_Quinoa_Scaffold_2008: 2020546-2030092 Chenopodium quinoa
AUR62011866 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2008: 2020546-2025545 Chenopodium quinoa
AUR62011866 5.0kb downstream 5.0kb downstream 9547 true C_Quinoa_Scaffold_2008: 2025546-2035092 Chenopodium quinoa
AUR62011866 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2008: 2030093-2035092 Chenopodium quinoa
AUR62011866 10.0kb upstream 10.0kb upstream 14547 true C_Quinoa_Scaffold_2008: 2015546-2030092 Chenopodium quinoa
AUR62011866 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2008: 2015546-2025545 Chenopodium quinoa
AUR62011866 10.0kb downstream 10.0kb downstream 14547 true C_Quinoa_Scaffold_2008: 2025546-2040092 Chenopodium quinoa
AUR62011866 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2008: 2030093-2040092 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123738536 5271 Pentapetalae View MSA
122786779 5272 Eudicot View MSA
122041756 5273 Angiosperm View MSA
121347508 5274 Embryophyte View MSA
123423893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain