Gene : AUR62013461 C. quinoa v1.0
Defline:  (1 of 3) K00166 - 2-oxoisovalerate dehydrogenase E1 component alpha subunit (BCKDHA, bkdA1) Genomic Order:  205
Name:  ? AUR62013461 Secondary Identifier:  ? PAC:36291924
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5046 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62013461 0.5kb upstream 0.5kb upstream 2679 true C_Quinoa_Scaffold_1611: 3303072-3305750 Chenopodium quinoa
AUR62013461 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1611: 3303072-3303571 Chenopodium quinoa
AUR62013461 0.5kb downstream 0.5kb downstream 2679 true C_Quinoa_Scaffold_1611: 3303572-3306250 Chenopodium quinoa
AUR62013461 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1611: 3305751-3306250 Chenopodium quinoa
AUR62013461 1.0kb upstream 1.0kb upstream 3179 true C_Quinoa_Scaffold_1611: 3302572-3305750 Chenopodium quinoa
AUR62013461 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1611: 3302572-3303571 Chenopodium quinoa
AUR62013461 1.0kb downstream 1.0kb downstream 3179 true C_Quinoa_Scaffold_1611: 3303572-3306750 Chenopodium quinoa
AUR62013461 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1611: 3305751-3306750 Chenopodium quinoa
AUR62013461 2.0kb upstream 2.0kb upstream 4179 true C_Quinoa_Scaffold_1611: 3301572-3305750 Chenopodium quinoa
AUR62013461 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1611: 3301572-3303571 Chenopodium quinoa
AUR62013461 2.0kb downstream 2.0kb downstream 4179 true C_Quinoa_Scaffold_1611: 3303572-3307750 Chenopodium quinoa
AUR62013461 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1611: 3305751-3307750 Chenopodium quinoa
AUR62013461 5.0kb upstream 5.0kb upstream 7179 true C_Quinoa_Scaffold_1611: 3298572-3305750 Chenopodium quinoa
AUR62013461 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1611: 3298572-3303571 Chenopodium quinoa
AUR62013461 5.0kb downstream 5.0kb downstream 7179 true C_Quinoa_Scaffold_1611: 3303572-3310750 Chenopodium quinoa
AUR62013461 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1611: 3305751-3310750 Chenopodium quinoa
AUR62013461 10.0kb upstream 10.0kb upstream 12179 true C_Quinoa_Scaffold_1611: 3293572-3305750 Chenopodium quinoa
AUR62013461 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1611: 3293572-3303571 Chenopodium quinoa
AUR62013461 10.0kb downstream 10.0kb downstream 12179 true C_Quinoa_Scaffold_1611: 3303572-3315750 Chenopodium quinoa
AUR62013461 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1611: 3305751-3315750 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain