Gene : AUR62036291 C. quinoa v1.0

Defline:  (1 of 2) PTHR31342:SF7 - PROTEIN CHUP1, CHLOROPLASTIC Genomic Order:  38
Name:  ? AUR62036291 Secondary Identifier:  ? PAC:36324760

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62036291 0.5kb upstream 0.5kb upstream 6502 true C_Quinoa_Scaffold_2738: 1544500-1551001 Chenopodium quinoa
AUR62036291 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2738: 1550502-1551001 Chenopodium quinoa
AUR62036291 0.5kb downstream 0.5kb downstream 6502 true C_Quinoa_Scaffold_2738: 1544000-1550501 Chenopodium quinoa
AUR62036291 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2738: 1544000-1544499 Chenopodium quinoa
AUR62036291 1.0kb upstream 1.0kb upstream 7002 true C_Quinoa_Scaffold_2738: 1544500-1551501 Chenopodium quinoa
AUR62036291 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2738: 1550502-1551501 Chenopodium quinoa
AUR62036291 1.0kb downstream 1.0kb downstream 7002 true C_Quinoa_Scaffold_2738: 1543500-1550501 Chenopodium quinoa
AUR62036291 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2738: 1543500-1544499 Chenopodium quinoa
AUR62036291 2.0kb upstream 2.0kb upstream 8002 true C_Quinoa_Scaffold_2738: 1544500-1552501 Chenopodium quinoa
AUR62036291 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2738: 1550502-1552501 Chenopodium quinoa
AUR62036291 2.0kb downstream 2.0kb downstream 8002 true C_Quinoa_Scaffold_2738: 1542500-1550501 Chenopodium quinoa
AUR62036291 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2738: 1542500-1544499 Chenopodium quinoa
AUR62036291 5.0kb upstream 5.0kb upstream 11002 true C_Quinoa_Scaffold_2738: 1544500-1555501 Chenopodium quinoa
AUR62036291 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2738: 1550502-1555501 Chenopodium quinoa
AUR62036291 5.0kb downstream 5.0kb downstream 11002 true C_Quinoa_Scaffold_2738: 1539500-1550501 Chenopodium quinoa
AUR62036291 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2738: 1539500-1544499 Chenopodium quinoa
AUR62036291 10.0kb upstream 10.0kb upstream 16002 true C_Quinoa_Scaffold_2738: 1544500-1560501 Chenopodium quinoa
AUR62036291 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2738: 1550502-1560501 Chenopodium quinoa
AUR62036291 10.0kb downstream 10.0kb downstream 16002 true C_Quinoa_Scaffold_2738: 1534500-1550501 Chenopodium quinoa
AUR62036291 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2738: 1534500-1544499 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739628 5271 Pentapetalae View MSA
122790649 5272 Eudicot View MSA
122047771 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain