Gene : AUR62038698 C. quinoa v1.0
Defline:  (1 of 3) PTHR11946:SF76 - ATP BINDING/VALINE-TRNA LIGASE/AMINOACYL-TRNA LIGASE Genomic Order:  40
Name:  ? AUR62038698 Secondary Identifier:  ? PAC:36294238
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62038698 0.5kb upstream 0.5kb upstream 27664 true C_Quinoa_Scaffold_1843: 2302930-2330593 Chenopodium quinoa
AUR62038698 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1843: 2302930-2303429 Chenopodium quinoa
AUR62038698 0.5kb downstream 0.5kb downstream 27664 true C_Quinoa_Scaffold_1843: 2303430-2331093 Chenopodium quinoa
AUR62038698 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1843: 2330594-2331093 Chenopodium quinoa
AUR62038698 1.0kb upstream 1.0kb upstream 28164 true C_Quinoa_Scaffold_1843: 2302430-2330593 Chenopodium quinoa
AUR62038698 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1843: 2302430-2303429 Chenopodium quinoa
AUR62038698 1.0kb downstream 1.0kb downstream 28164 true C_Quinoa_Scaffold_1843: 2303430-2331593 Chenopodium quinoa
AUR62038698 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1843: 2330594-2331593 Chenopodium quinoa
AUR62038698 2.0kb upstream 2.0kb upstream 29164 true C_Quinoa_Scaffold_1843: 2301430-2330593 Chenopodium quinoa
AUR62038698 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1843: 2301430-2303429 Chenopodium quinoa
AUR62038698 2.0kb downstream 2.0kb downstream 29164 true C_Quinoa_Scaffold_1843: 2303430-2332593 Chenopodium quinoa
AUR62038698 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1843: 2330594-2332593 Chenopodium quinoa
AUR62038698 5.0kb upstream 5.0kb upstream 32164 true C_Quinoa_Scaffold_1843: 2298430-2330593 Chenopodium quinoa
AUR62038698 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1843: 2298430-2303429 Chenopodium quinoa
AUR62038698 5.0kb downstream 5.0kb downstream 32164 true C_Quinoa_Scaffold_1843: 2303430-2335593 Chenopodium quinoa
AUR62038698 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1843: 2330594-2335593 Chenopodium quinoa
AUR62038698 10.0kb upstream 10.0kb upstream 37164 true C_Quinoa_Scaffold_1843: 2293430-2330593 Chenopodium quinoa
AUR62038698 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1843: 2293430-2303429 Chenopodium quinoa
AUR62038698 10.0kb downstream 10.0kb downstream 37164 true C_Quinoa_Scaffold_1843: 2303430-2340593 Chenopodium quinoa
AUR62038698 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1843: 2330594-2340593 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain