Gene : AUR62030747 C. quinoa v1.0
Defline:  (1 of 2) K14827 - pre-rRNA-processing protein IPI1 (IPI1, TEX10) Genomic Order:  64
Name:  ? AUR62030747 Secondary Identifier:  ? PAC:36290978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62030747 0.5kb upstream 0.5kb upstream 21166 true C_Quinoa_Scaffold_2000: 1699042-1720207 Chenopodium quinoa
AUR62030747 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2000: 1719708-1720207 Chenopodium quinoa
AUR62030747 0.5kb downstream 0.5kb downstream 21166 true C_Quinoa_Scaffold_2000: 1698542-1719707 Chenopodium quinoa
AUR62030747 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2000: 1698542-1699041 Chenopodium quinoa
AUR62030747 1.0kb upstream 1.0kb upstream 21666 true C_Quinoa_Scaffold_2000: 1699042-1720707 Chenopodium quinoa
AUR62030747 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2000: 1719708-1720707 Chenopodium quinoa
AUR62030747 1.0kb downstream 1.0kb downstream 21666 true C_Quinoa_Scaffold_2000: 1698042-1719707 Chenopodium quinoa
AUR62030747 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2000: 1698042-1699041 Chenopodium quinoa
AUR62030747 2.0kb upstream 2.0kb upstream 22666 true C_Quinoa_Scaffold_2000: 1699042-1721707 Chenopodium quinoa
AUR62030747 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2000: 1719708-1721707 Chenopodium quinoa
AUR62030747 2.0kb downstream 2.0kb downstream 22666 true C_Quinoa_Scaffold_2000: 1697042-1719707 Chenopodium quinoa
AUR62030747 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2000: 1697042-1699041 Chenopodium quinoa
AUR62030747 5.0kb upstream 5.0kb upstream 25666 true C_Quinoa_Scaffold_2000: 1699042-1724707 Chenopodium quinoa
AUR62030747 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2000: 1719708-1724707 Chenopodium quinoa
AUR62030747 5.0kb downstream 5.0kb downstream 25666 true C_Quinoa_Scaffold_2000: 1694042-1719707 Chenopodium quinoa
AUR62030747 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2000: 1694042-1699041 Chenopodium quinoa
AUR62030747 10.0kb upstream 10.0kb upstream 30666 true C_Quinoa_Scaffold_2000: 1699042-1729707 Chenopodium quinoa
AUR62030747 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2000: 1719708-1729707 Chenopodium quinoa
AUR62030747 10.0kb downstream 10.0kb downstream 30666 true C_Quinoa_Scaffold_2000: 1689042-1719707 Chenopodium quinoa
AUR62030747 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2000: 1689042-1699041 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain