Gene : AUR62018127 C. quinoa v1.0
Defline:  (1 of 3) K01850 - chorismate mutase (E5.4.99.5) Genomic Order:  95
Name:  ? AUR62018127 Secondary Identifier:  ? PAC:36281456
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-3461 Chenopodium quinoa pathologic  
Cquinoa PWY-3462 Chenopodium quinoa pathologic  
Cquinoa PWY-3481 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62018127 0.5kb upstream 0.5kb upstream 8473 true C_Quinoa_Scaffold_2048: 4235563-4244035 Chenopodium quinoa
AUR62018127 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2048: 4243536-4244035 Chenopodium quinoa
AUR62018127 0.5kb downstream 0.5kb downstream 8473 true C_Quinoa_Scaffold_2048: 4235063-4243535 Chenopodium quinoa
AUR62018127 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2048: 4235063-4235562 Chenopodium quinoa
AUR62018127 1.0kb upstream 1.0kb upstream 8973 true C_Quinoa_Scaffold_2048: 4235563-4244535 Chenopodium quinoa
AUR62018127 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2048: 4243536-4244535 Chenopodium quinoa
AUR62018127 1.0kb downstream 1.0kb downstream 8973 true C_Quinoa_Scaffold_2048: 4234563-4243535 Chenopodium quinoa
AUR62018127 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2048: 4234563-4235562 Chenopodium quinoa
AUR62018127 2.0kb upstream 2.0kb upstream 9973 true C_Quinoa_Scaffold_2048: 4235563-4245535 Chenopodium quinoa
AUR62018127 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2048: 4243536-4245535 Chenopodium quinoa
AUR62018127 2.0kb downstream 2.0kb downstream 9973 true C_Quinoa_Scaffold_2048: 4233563-4243535 Chenopodium quinoa
AUR62018127 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2048: 4233563-4235562 Chenopodium quinoa
AUR62018127 5.0kb upstream 5.0kb upstream 12973 true C_Quinoa_Scaffold_2048: 4235563-4248535 Chenopodium quinoa
AUR62018127 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2048: 4243536-4248535 Chenopodium quinoa
AUR62018127 5.0kb downstream 5.0kb downstream 12973 true C_Quinoa_Scaffold_2048: 4230563-4243535 Chenopodium quinoa
AUR62018127 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2048: 4230563-4235562 Chenopodium quinoa
AUR62018127 10.0kb upstream 10.0kb upstream 17973 true C_Quinoa_Scaffold_2048: 4235563-4253535 Chenopodium quinoa
AUR62018127 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2048: 4243536-4253535 Chenopodium quinoa
AUR62018127 10.0kb downstream 10.0kb downstream 17973 true C_Quinoa_Scaffold_2048: 4225563-4243535 Chenopodium quinoa
AUR62018127 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2048: 4225563-4235562 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain