Gene : AUR62015046 C. quinoa v1.0

Defline:  (1 of 2) K08913 - light-harvesting complex II chlorophyll a/b binding protein 2 (LHCB2) Genomic Order:  123
Name:  ? AUR62015046 Secondary Identifier:  ? PAC:36318745

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62015046 0.5kb upstream 0.5kb upstream 2055 true C_Quinoa_Scaffold_2888: 2993839-2995893 Chenopodium quinoa
AUR62015046 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2888: 2993839-2994338 Chenopodium quinoa
AUR62015046 0.5kb downstream 0.5kb downstream 2055 true C_Quinoa_Scaffold_2888: 2994339-2996393 Chenopodium quinoa
AUR62015046 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2888: 2995894-2996393 Chenopodium quinoa
AUR62015046 1.0kb upstream 1.0kb upstream 2555 true C_Quinoa_Scaffold_2888: 2993339-2995893 Chenopodium quinoa
AUR62015046 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2888: 2993339-2994338 Chenopodium quinoa
AUR62015046 1.0kb downstream 1.0kb downstream 2555 true C_Quinoa_Scaffold_2888: 2994339-2996893 Chenopodium quinoa
AUR62015046 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2888: 2995894-2996893 Chenopodium quinoa
AUR62015046 2.0kb upstream 2.0kb upstream 3555 true C_Quinoa_Scaffold_2888: 2992339-2995893 Chenopodium quinoa
AUR62015046 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2888: 2992339-2994338 Chenopodium quinoa
AUR62015046 2.0kb downstream 2.0kb downstream 3555 true C_Quinoa_Scaffold_2888: 2994339-2997893 Chenopodium quinoa
AUR62015046 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2888: 2995894-2997893 Chenopodium quinoa
AUR62015046 5.0kb upstream 5.0kb upstream 6555 true C_Quinoa_Scaffold_2888: 2989339-2995893 Chenopodium quinoa
AUR62015046 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2888: 2989339-2994338 Chenopodium quinoa
AUR62015046 5.0kb downstream 5.0kb downstream 6555 true C_Quinoa_Scaffold_2888: 2994339-3000893 Chenopodium quinoa
AUR62015046 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2888: 2995894-3000893 Chenopodium quinoa
AUR62015046 10.0kb upstream 10.0kb upstream 11555 true C_Quinoa_Scaffold_2888: 2984339-2995893 Chenopodium quinoa
AUR62015046 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2888: 2984339-2994338 Chenopodium quinoa
AUR62015046 10.0kb downstream 10.0kb downstream 11555 true C_Quinoa_Scaffold_2888: 2994339-3005893 Chenopodium quinoa
AUR62015046 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2888: 2995894-3005893 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain