Gene : Phvul.001G043500 P. vulgaris v2.1
Genomic Order:  408 Name:  ? Phvul.001G043500
Secondary Identifier:  ? PAC:37169279
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G043500 0.5kb upstream 0.5kb upstream 1265 true Chr01: 3976839-3978103 Phaseolus vulgaris
Phvul.001G043500 0.5kb upstream 0.5kb upstream 500 false Chr01: 3976839-3977338 Phaseolus vulgaris
Phvul.001G043500 0.5kb downstream 0.5kb downstream 1265 true Chr01: 3977339-3978603 Phaseolus vulgaris
Phvul.001G043500 0.5kb downstream 0.5kb downstream 500 false Chr01: 3978104-3978603 Phaseolus vulgaris
Phvul.001G043500 1.0kb upstream 1.0kb upstream 1765 true Chr01: 3976339-3978103 Phaseolus vulgaris
Phvul.001G043500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3976339-3977338 Phaseolus vulgaris
Phvul.001G043500 1.0kb downstream 1.0kb downstream 1765 true Chr01: 3977339-3979103 Phaseolus vulgaris
Phvul.001G043500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3978104-3979103 Phaseolus vulgaris
Phvul.001G043500 2.0kb upstream 2.0kb upstream 2765 true Chr01: 3975339-3978103 Phaseolus vulgaris
Phvul.001G043500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3975339-3977338 Phaseolus vulgaris
Phvul.001G043500 2.0kb downstream 2.0kb downstream 2765 true Chr01: 3977339-3980103 Phaseolus vulgaris
Phvul.001G043500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3978104-3980103 Phaseolus vulgaris
Phvul.001G043500 5.0kb upstream 5.0kb upstream 5765 true Chr01: 3972339-3978103 Phaseolus vulgaris
Phvul.001G043500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3972339-3977338 Phaseolus vulgaris
Phvul.001G043500 5.0kb downstream 5.0kb downstream 5765 true Chr01: 3977339-3983103 Phaseolus vulgaris
Phvul.001G043500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3978104-3983103 Phaseolus vulgaris
Phvul.001G043500 10.0kb upstream 10.0kb upstream 10765 true Chr01: 3967339-3978103 Phaseolus vulgaris
Phvul.001G043500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3967339-3977338 Phaseolus vulgaris
Phvul.001G043500 10.0kb downstream 10.0kb downstream 10765 true Chr01: 3977339-3988103 Phaseolus vulgaris
Phvul.001G043500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3978104-3988103 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618202 5273 Angiosperm View MSA
122255250 5265 Fabidae View MSA
123997051 5270 Rosid View MSA
123571409 5271 Pentapetalae View MSA
122606135 5272 Eudicot View MSA
120890311 5274 Embryophyte View MSA
122930973 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.787568 0.0 3.07241    
cufflinks 1.64005 0.0 6.02835    
cufflinks 6.00162 0.0 19.1672    
cufflinks 2.58291 0.0 9.03192    
cufflinks 9.57071 0.0 29.2694    
cufflinks 0.464295 0.0 1.88678 Low Low
cufflinks 8.20845 0.0 25.3014    
cufflinks 4.65743 0.0 15.3284    
cufflinks 19.5443 0.0 54.6648   High
cufflinks 0.0653249 0.0 0.322445 Low Low
cufflinks 4.08412 0.0 13.7272    

0 Strain