Gene : Phvul.001G044100 P. vulgaris v2.1
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  402
Name:  ? Phvul.001G044100 Secondary Identifier:  ? PAC:37168727
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G044100 0.5kb upstream 0.5kb upstream 6695 true Chr01: 3893967-3900661 Phaseolus vulgaris
Phvul.001G044100 0.5kb upstream 0.5kb upstream 500 false Chr01: 3900162-3900661 Phaseolus vulgaris
Phvul.001G044100 0.5kb downstream 0.5kb downstream 6695 true Chr01: 3893467-3900161 Phaseolus vulgaris
Phvul.001G044100 0.5kb downstream 0.5kb downstream 500 false Chr01: 3893467-3893966 Phaseolus vulgaris
Phvul.001G044100 1.0kb upstream 1.0kb upstream 7195 true Chr01: 3893967-3901161 Phaseolus vulgaris
Phvul.001G044100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3900162-3901161 Phaseolus vulgaris
Phvul.001G044100 1.0kb downstream 1.0kb downstream 7195 true Chr01: 3892967-3900161 Phaseolus vulgaris
Phvul.001G044100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3892967-3893966 Phaseolus vulgaris
Phvul.001G044100 2.0kb upstream 2.0kb upstream 8195 true Chr01: 3893967-3902161 Phaseolus vulgaris
Phvul.001G044100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3900162-3902161 Phaseolus vulgaris
Phvul.001G044100 2.0kb downstream 2.0kb downstream 8195 true Chr01: 3891967-3900161 Phaseolus vulgaris
Phvul.001G044100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3891967-3893966 Phaseolus vulgaris
Phvul.001G044100 5.0kb upstream 5.0kb upstream 11195 true Chr01: 3893967-3905161 Phaseolus vulgaris
Phvul.001G044100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3900162-3905161 Phaseolus vulgaris
Phvul.001G044100 5.0kb downstream 5.0kb downstream 11195 true Chr01: 3888967-3900161 Phaseolus vulgaris
Phvul.001G044100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3888967-3893966 Phaseolus vulgaris
Phvul.001G044100 10.0kb upstream 10.0kb upstream 16195 true Chr01: 3893967-3910161 Phaseolus vulgaris
Phvul.001G044100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3900162-3910161 Phaseolus vulgaris
Phvul.001G044100 10.0kb downstream 10.0kb downstream 16195 true Chr01: 3883967-3900161 Phaseolus vulgaris
Phvul.001G044100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3883967-3893966 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312476 5265 Fabidae View MSA
124067558 5270 Rosid View MSA
123739395 5271 Pentapetalae View MSA
122785869 5272 Eudicot View MSA
122042192 5273 Angiosperm View MSA
121344572 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.07077 0.0 16.5169    
cufflinks 6.81828 0.0 23.1367   High
cufflinks 6.11632 0.0 21.332   High
cufflinks 4.13141 0.0 17.1331    
cufflinks 1.92532 0.0 12.193    
cufflinks 6.06611 0.0 26.0904   High
cufflinks 1.38521 0.0 5.70063   Low
cufflinks 2.49618 0.0 8.72534    
cufflinks 1.15111 0.0 4.92386   Low
cufflinks 4.68183 0.0 19.1441    
cufflinks 2.39395 0.0 11.6291    

0 Strain