Gene : Phvul.001G042400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR19315:SF9 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 Genomic Order:  420
Name:  ? Phvul.001G042400 Secondary Identifier:  ? PAC:37170859
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G042400 0.5kb upstream 0.5kb upstream 4957 true Chr01: 4080921-4085877 Phaseolus vulgaris
Phvul.001G042400 0.5kb upstream 0.5kb upstream 500 false Chr01: 4080921-4081420 Phaseolus vulgaris
Phvul.001G042400 0.5kb downstream 0.5kb downstream 4957 true Chr01: 4081421-4086377 Phaseolus vulgaris
Phvul.001G042400 0.5kb downstream 0.5kb downstream 500 false Chr01: 4085878-4086377 Phaseolus vulgaris
Phvul.001G042400 1.0kb upstream 1.0kb upstream 5457 true Chr01: 4080421-4085877 Phaseolus vulgaris
Phvul.001G042400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4080421-4081420 Phaseolus vulgaris
Phvul.001G042400 1.0kb downstream 1.0kb downstream 5457 true Chr01: 4081421-4086877 Phaseolus vulgaris
Phvul.001G042400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4085878-4086877 Phaseolus vulgaris
Phvul.001G042400 2.0kb upstream 2.0kb upstream 6457 true Chr01: 4079421-4085877 Phaseolus vulgaris
Phvul.001G042400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4079421-4081420 Phaseolus vulgaris
Phvul.001G042400 2.0kb downstream 2.0kb downstream 6457 true Chr01: 4081421-4087877 Phaseolus vulgaris
Phvul.001G042400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4085878-4087877 Phaseolus vulgaris
Phvul.001G042400 5.0kb upstream 5.0kb upstream 9457 true Chr01: 4076421-4085877 Phaseolus vulgaris
Phvul.001G042400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4076421-4081420 Phaseolus vulgaris
Phvul.001G042400 5.0kb downstream 5.0kb downstream 9457 true Chr01: 4081421-4090877 Phaseolus vulgaris
Phvul.001G042400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4085878-4090877 Phaseolus vulgaris
Phvul.001G042400 10.0kb upstream 10.0kb upstream 14457 true Chr01: 4071421-4085877 Phaseolus vulgaris
Phvul.001G042400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4071421-4081420 Phaseolus vulgaris
Phvul.001G042400 10.0kb downstream 10.0kb downstream 14457 true Chr01: 4081421-4095877 Phaseolus vulgaris
Phvul.001G042400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4085878-4095877 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041246 5273 Angiosperm View MSA
122304432 5265 Fabidae View MSA
124062578 5270 Rosid View MSA
123741681 5271 Pentapetalae View MSA
122786574 5272 Eudicot View MSA
121345382 5274 Embryophyte View MSA
123423823 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.3979 0.0 218.036 High  
cufflinks 51.7326 0.0 134.074 High  
cufflinks 53.4281 0.0 138.48 High  
cufflinks 109.123 0.0 294.227 High High
cufflinks 70.2845 0.0 184.157 High  
cufflinks 37.7783 0.0 97.6796 High Low
cufflinks 51.8507 0.0 134.479 High  
cufflinks 48.8418 0.0 126.478 High  
cufflinks 79.0646 0.0 208.683 High  
cufflinks 63.884 0.0 166.619 High  
cufflinks 76.8117 0.0 202.389 High  

0 Strain