Gene : Phvul.001G046300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR26402:SF558 - TWO-COMPONENT RESPONSE REGULATOR ARR18 Genomic Order:  468
Name:  ? Phvul.001G046300 Secondary Identifier:  ? PAC:37168673
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G046300 0.5kb upstream 0.5kb upstream 5003 true Chr01: 4793935-4798937 Phaseolus vulgaris
Phvul.001G046300 0.5kb upstream 0.5kb upstream 500 false Chr01: 4798438-4798937 Phaseolus vulgaris
Phvul.001G046300 0.5kb downstream 0.5kb downstream 5003 true Chr01: 4793435-4798437 Phaseolus vulgaris
Phvul.001G046300 0.5kb downstream 0.5kb downstream 500 false Chr01: 4793435-4793934 Phaseolus vulgaris
Phvul.001G046300 1.0kb upstream 1.0kb upstream 5503 true Chr01: 4793935-4799437 Phaseolus vulgaris
Phvul.001G046300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4798438-4799437 Phaseolus vulgaris
Phvul.001G046300 1.0kb downstream 1.0kb downstream 5503 true Chr01: 4792935-4798437 Phaseolus vulgaris
Phvul.001G046300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4792935-4793934 Phaseolus vulgaris
Phvul.001G046300 2.0kb upstream 2.0kb upstream 6503 true Chr01: 4793935-4800437 Phaseolus vulgaris
Phvul.001G046300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4798438-4800437 Phaseolus vulgaris
Phvul.001G046300 2.0kb downstream 2.0kb downstream 6503 true Chr01: 4791935-4798437 Phaseolus vulgaris
Phvul.001G046300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4791935-4793934 Phaseolus vulgaris
Phvul.001G046300 5.0kb upstream 5.0kb upstream 9503 true Chr01: 4793935-4803437 Phaseolus vulgaris
Phvul.001G046300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4798438-4803437 Phaseolus vulgaris
Phvul.001G046300 5.0kb downstream 5.0kb downstream 9503 true Chr01: 4788935-4798437 Phaseolus vulgaris
Phvul.001G046300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4788935-4793934 Phaseolus vulgaris
Phvul.001G046300 10.0kb upstream 10.0kb upstream 14503 true Chr01: 4793935-4808437 Phaseolus vulgaris
Phvul.001G046300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4798438-4808437 Phaseolus vulgaris
Phvul.001G046300 10.0kb downstream 10.0kb downstream 14503 true Chr01: 4783935-4798437 Phaseolus vulgaris
Phvul.001G046300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4783935-4793934 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253685 5265 Fabidae View MSA
124066556 5270 Rosid View MSA
123743019 5271 Pentapetalae View MSA
122794992 5272 Eudicot View MSA
122046699 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.279834 0.0 1.05946 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0764894 0.0 0.321155 Low  
cufflinks 0.509656 0.0 1.8503 Low  
cufflinks 0.0272587 0.0 0.127995 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.45122 0.0 4.65761    
cufflinks 1.08743 0.0 3.58766    
cufflinks 5.80474 0.0 16.0695   High
cufflinks 0.0554569 0.0 0.240675 Low  
cufflinks 0.0319394 0.0 0.147151 Low Low

0 Strain