Gene : Phvul.001G046800 P. vulgaris v2.1
Defline:  (1 of 16) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  473
Name:  ? Phvul.001G046800 Secondary Identifier:  ? PAC:37169772
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G046800 0.5kb upstream 0.5kb upstream 2494 true Chr01: 4872187-4874680 Phaseolus vulgaris
Phvul.001G046800 0.5kb upstream 0.5kb upstream 500 false Chr01: 4874181-4874680 Phaseolus vulgaris
Phvul.001G046800 0.5kb downstream 0.5kb downstream 2494 true Chr01: 4871687-4874180 Phaseolus vulgaris
Phvul.001G046800 0.5kb downstream 0.5kb downstream 500 false Chr01: 4871687-4872186 Phaseolus vulgaris
Phvul.001G046800 1.0kb upstream 1.0kb upstream 2994 true Chr01: 4872187-4875180 Phaseolus vulgaris
Phvul.001G046800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4874181-4875180 Phaseolus vulgaris
Phvul.001G046800 1.0kb downstream 1.0kb downstream 2994 true Chr01: 4871187-4874180 Phaseolus vulgaris
Phvul.001G046800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4871187-4872186 Phaseolus vulgaris
Phvul.001G046800 2.0kb upstream 2.0kb upstream 3994 true Chr01: 4872187-4876180 Phaseolus vulgaris
Phvul.001G046800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4874181-4876180 Phaseolus vulgaris
Phvul.001G046800 2.0kb downstream 2.0kb downstream 3994 true Chr01: 4870187-4874180 Phaseolus vulgaris
Phvul.001G046800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4870187-4872186 Phaseolus vulgaris
Phvul.001G046800 5.0kb upstream 5.0kb upstream 6994 true Chr01: 4872187-4879180 Phaseolus vulgaris
Phvul.001G046800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4874181-4879180 Phaseolus vulgaris
Phvul.001G046800 5.0kb downstream 5.0kb downstream 6994 true Chr01: 4867187-4874180 Phaseolus vulgaris
Phvul.001G046800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4867187-4872186 Phaseolus vulgaris
Phvul.001G046800 10.0kb upstream 10.0kb upstream 11994 true Chr01: 4872187-4884180 Phaseolus vulgaris
Phvul.001G046800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4874181-4884180 Phaseolus vulgaris
Phvul.001G046800 10.0kb downstream 10.0kb downstream 11994 true Chr01: 4862187-4874180 Phaseolus vulgaris
Phvul.001G046800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4862187-4872186 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040994 5273 Angiosperm View MSA
122297647 5265 Fabidae View MSA
124041955 5270 Rosid View MSA
123743333 5271 Pentapetalae View MSA
122793790 5272 Eudicot View MSA
121309781 5274 Embryophyte View MSA
123347442 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.51338 0.0 25.637    
cufflinks 4.31315 0.0 12.4927    
cufflinks 4.92715 0.0 14.1015    
cufflinks 10.7273 0.0 28.6666    
cufflinks 15.5354 0.0 40.5763    
cufflinks 6.59346 0.0 18.3072    
cufflinks 15.7549 0.0 40.9807    
cufflinks 17.6512 0.0 45.8207    
cufflinks 11.3855 0.0 30.1456    
cufflinks 1.6234 0.0 5.26593   Low
cufflinks 15.8347 0.0 41.2536    

0 Strain