Gene : Phvul.001G047400 P. vulgaris v2.1
Genomic Order:  479 Name:  ? Phvul.001G047400
Secondary Identifier:  ? PAC:37168904
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G047400 0.5kb upstream 0.5kb upstream 1290 true Chr01: 4985485-4986774 Phaseolus vulgaris
Phvul.001G047400 0.5kb upstream 0.5kb upstream 500 false Chr01: 4986275-4986774 Phaseolus vulgaris
Phvul.001G047400 0.5kb downstream 0.5kb downstream 1290 true Chr01: 4984985-4986274 Phaseolus vulgaris
Phvul.001G047400 0.5kb downstream 0.5kb downstream 500 false Chr01: 4984985-4985484 Phaseolus vulgaris
Phvul.001G047400 1.0kb upstream 1.0kb upstream 1790 true Chr01: 4985485-4987274 Phaseolus vulgaris
Phvul.001G047400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4986275-4987274 Phaseolus vulgaris
Phvul.001G047400 1.0kb downstream 1.0kb downstream 1790 true Chr01: 4984485-4986274 Phaseolus vulgaris
Phvul.001G047400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4984485-4985484 Phaseolus vulgaris
Phvul.001G047400 2.0kb upstream 2.0kb upstream 2790 true Chr01: 4985485-4988274 Phaseolus vulgaris
Phvul.001G047400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4986275-4988274 Phaseolus vulgaris
Phvul.001G047400 2.0kb downstream 2.0kb downstream 2790 true Chr01: 4983485-4986274 Phaseolus vulgaris
Phvul.001G047400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4983485-4985484 Phaseolus vulgaris
Phvul.001G047400 5.0kb upstream 5.0kb upstream 5790 true Chr01: 4985485-4991274 Phaseolus vulgaris
Phvul.001G047400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4986275-4991274 Phaseolus vulgaris
Phvul.001G047400 5.0kb downstream 5.0kb downstream 5790 true Chr01: 4980485-4986274 Phaseolus vulgaris
Phvul.001G047400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4980485-4985484 Phaseolus vulgaris
Phvul.001G047400 10.0kb upstream 10.0kb upstream 10790 true Chr01: 4985485-4996274 Phaseolus vulgaris
Phvul.001G047400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4986275-4996274 Phaseolus vulgaris
Phvul.001G047400 10.0kb downstream 10.0kb downstream 10790 true Chr01: 4975485-4986274 Phaseolus vulgaris
Phvul.001G047400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4975485-4985484 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297433 5265 Fabidae View MSA
124065781 5270 Rosid View MSA
123747015 5271 Pentapetalae View MSA
122794452 5272 Eudicot View MSA
122048166 5273 Angiosperm View MSA
121310871 5274 Embryophyte View MSA
123348254 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.594454 0.0 2.3335    
cufflinks 0.298983 0.0 1.24752 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.08714 0.0 7.36182   High
cufflinks 0.243646 0.0 1.02757 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.218792 0.0 0.931494 Low  
cufflinks 0.412156 0.0 1.66562 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.734049 0.0 2.84715    
cufflinks 0.15243 0.0 0.674394 Low Low

0 Strain