Gene : Phvul.001G047500 P. vulgaris v2.1
Defline:  (1 of 1) K02948 - small subunit ribosomal protein S11 (RP-S11, MRPS11, rpsK) Genomic Order:  480
Name:  ? Phvul.001G047500 Secondary Identifier:  ? PAC:37168050
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G047500 0.5kb upstream 0.5kb upstream 1046 true Chr01: 4994591-4995636 Phaseolus vulgaris
Phvul.001G047500 0.5kb upstream 0.5kb upstream 500 false Chr01: 4994591-4995090 Phaseolus vulgaris
Phvul.001G047500 0.5kb downstream 0.5kb downstream 1046 true Chr01: 4995091-4996136 Phaseolus vulgaris
Phvul.001G047500 0.5kb downstream 0.5kb downstream 500 false Chr01: 4995637-4996136 Phaseolus vulgaris
Phvul.001G047500 1.0kb upstream 1.0kb upstream 1546 true Chr01: 4994091-4995636 Phaseolus vulgaris
Phvul.001G047500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4994091-4995090 Phaseolus vulgaris
Phvul.001G047500 1.0kb downstream 1.0kb downstream 1546 true Chr01: 4995091-4996636 Phaseolus vulgaris
Phvul.001G047500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4995637-4996636 Phaseolus vulgaris
Phvul.001G047500 2.0kb upstream 2.0kb upstream 2546 true Chr01: 4993091-4995636 Phaseolus vulgaris
Phvul.001G047500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4993091-4995090 Phaseolus vulgaris
Phvul.001G047500 2.0kb downstream 2.0kb downstream 2546 true Chr01: 4995091-4997636 Phaseolus vulgaris
Phvul.001G047500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4995637-4997636 Phaseolus vulgaris
Phvul.001G047500 5.0kb upstream 5.0kb upstream 5546 true Chr01: 4990091-4995636 Phaseolus vulgaris
Phvul.001G047500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4990091-4995090 Phaseolus vulgaris
Phvul.001G047500 5.0kb downstream 5.0kb downstream 5546 true Chr01: 4995091-5000636 Phaseolus vulgaris
Phvul.001G047500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4995637-5000636 Phaseolus vulgaris
Phvul.001G047500 10.0kb upstream 10.0kb upstream 10546 true Chr01: 4985091-4995636 Phaseolus vulgaris
Phvul.001G047500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4985091-4995090 Phaseolus vulgaris
Phvul.001G047500 10.0kb downstream 10.0kb downstream 10546 true Chr01: 4995091-5005636 Phaseolus vulgaris
Phvul.001G047500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4995637-5005636 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296833 5265 Fabidae View MSA
124071530 5270 Rosid View MSA
123751156 5271 Pentapetalae View MSA
122793979 5272 Eudicot View MSA
122049746 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08168 0.0 4.24607    
cufflinks 1.06487 0.0 4.17666    
cufflinks 19.8468 0.0 58.0165   High
cufflinks 7.77181 0.0 25.2539    
cufflinks 5.69028 0.0 19.3369    
cufflinks 69.5828 0.0 182.454 High High
cufflinks 0.381417 0.0 1.62386 Low Low
cufflinks 1.67885 0.0 6.33374    
cufflinks 1.84906 0.0 6.92718    
cufflinks 11.8777 0.0 36.879    
cufflinks 0.446489 0.0 1.88282 Low Low

0 Strain