Gene : Phvul.001G033300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13479:SF44 - F10K1.8 PROTEIN Genomic Order:  337
Name:  ? Phvul.001G033300 Secondary Identifier:  ? PAC:37168175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G033300 0.5kb upstream 0.5kb upstream 7401 true Chr01: 3119045-3126445 Phaseolus vulgaris
Phvul.001G033300 0.5kb upstream 0.5kb upstream 500 false Chr01: 3119045-3119544 Phaseolus vulgaris
Phvul.001G033300 0.5kb downstream 0.5kb downstream 7401 true Chr01: 3119545-3126945 Phaseolus vulgaris
Phvul.001G033300 0.5kb downstream 0.5kb downstream 500 false Chr01: 3126446-3126945 Phaseolus vulgaris
Phvul.001G033300 1.0kb upstream 1.0kb upstream 7901 true Chr01: 3118545-3126445 Phaseolus vulgaris
Phvul.001G033300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3118545-3119544 Phaseolus vulgaris
Phvul.001G033300 1.0kb downstream 1.0kb downstream 7901 true Chr01: 3119545-3127445 Phaseolus vulgaris
Phvul.001G033300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3126446-3127445 Phaseolus vulgaris
Phvul.001G033300 2.0kb upstream 2.0kb upstream 8901 true Chr01: 3117545-3126445 Phaseolus vulgaris
Phvul.001G033300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3117545-3119544 Phaseolus vulgaris
Phvul.001G033300 2.0kb downstream 2.0kb downstream 8901 true Chr01: 3119545-3128445 Phaseolus vulgaris
Phvul.001G033300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3126446-3128445 Phaseolus vulgaris
Phvul.001G033300 5.0kb upstream 5.0kb upstream 11901 true Chr01: 3114545-3126445 Phaseolus vulgaris
Phvul.001G033300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3114545-3119544 Phaseolus vulgaris
Phvul.001G033300 5.0kb downstream 5.0kb downstream 11901 true Chr01: 3119545-3131445 Phaseolus vulgaris
Phvul.001G033300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3126446-3131445 Phaseolus vulgaris
Phvul.001G033300 10.0kb upstream 10.0kb upstream 16901 true Chr01: 3109545-3126445 Phaseolus vulgaris
Phvul.001G033300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3109545-3119544 Phaseolus vulgaris
Phvul.001G033300 10.0kb downstream 10.0kb downstream 16901 true Chr01: 3119545-3136445 Phaseolus vulgaris
Phvul.001G033300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3126446-3136445 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310637 5265 Fabidae View MSA
124061211 5270 Rosid View MSA
123739724 5271 Pentapetalae View MSA
122786736 5272 Eudicot View MSA
122043226 5273 Angiosperm View MSA
121343856 5274 Embryophyte View MSA
123427429 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9978 0.0 65.8465    
cufflinks 12.9852 0.0 51.581    
cufflinks 15.072 0.0 62.1516   High
cufflinks 13.8221 0.0 60.628    
cufflinks 8.86691 0.0 38.6342   Low
cufflinks 12.2131 0.0 55.2588    
cufflinks 12.4775 0.0 48.5945    
cufflinks 16.0393 0.0 65.3763   High
cufflinks 13.1867 0.0 56.9123    
cufflinks 9.71716 0.0 47.5409   Low
cufflinks 11.563 0.0 46.517    

0 Strain