Gene : Phvul.001G034000 P. vulgaris v2.1
Genomic Order:  343 Name:  ? Phvul.001G034000
Secondary Identifier:  ? PAC:37170643
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G034000 0.5kb upstream 0.5kb upstream 4805 true Chr01: 3199695-3204499 Phaseolus vulgaris
Phvul.001G034000 0.5kb upstream 0.5kb upstream 500 false Chr01: 3199695-3200194 Phaseolus vulgaris
Phvul.001G034000 0.5kb downstream 0.5kb downstream 4805 true Chr01: 3200195-3204999 Phaseolus vulgaris
Phvul.001G034000 0.5kb downstream 0.5kb downstream 500 false Chr01: 3204500-3204999 Phaseolus vulgaris
Phvul.001G034000 1.0kb upstream 1.0kb upstream 5305 true Chr01: 3199195-3204499 Phaseolus vulgaris
Phvul.001G034000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3199195-3200194 Phaseolus vulgaris
Phvul.001G034000 1.0kb downstream 1.0kb downstream 5305 true Chr01: 3200195-3205499 Phaseolus vulgaris
Phvul.001G034000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3204500-3205499 Phaseolus vulgaris
Phvul.001G034000 2.0kb upstream 2.0kb upstream 6305 true Chr01: 3198195-3204499 Phaseolus vulgaris
Phvul.001G034000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3198195-3200194 Phaseolus vulgaris
Phvul.001G034000 2.0kb downstream 2.0kb downstream 6305 true Chr01: 3200195-3206499 Phaseolus vulgaris
Phvul.001G034000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3204500-3206499 Phaseolus vulgaris
Phvul.001G034000 5.0kb upstream 5.0kb upstream 9305 true Chr01: 3195195-3204499 Phaseolus vulgaris
Phvul.001G034000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3195195-3200194 Phaseolus vulgaris
Phvul.001G034000 5.0kb downstream 5.0kb downstream 9305 true Chr01: 3200195-3209499 Phaseolus vulgaris
Phvul.001G034000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3204500-3209499 Phaseolus vulgaris
Phvul.001G034000 10.0kb upstream 10.0kb upstream 14305 true Chr01: 3190195-3204499 Phaseolus vulgaris
Phvul.001G034000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3190195-3200194 Phaseolus vulgaris
Phvul.001G034000 10.0kb downstream 10.0kb downstream 14305 true Chr01: 3200195-3214499 Phaseolus vulgaris
Phvul.001G034000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3204500-3214499 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026555 5273 Angiosperm View MSA
122296449 5265 Fabidae View MSA
124070957 5270 Rosid View MSA
123740647 5271 Pentapetalae View MSA
122788070 5272 Eudicot View MSA
121349076 5274 Embryophyte View MSA
123381154 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.19459 0.0 9.41266    
cufflinks 7.21466 0.0 19.7125   High
cufflinks 1.60727 0.0 5.16315   Low
cufflinks 3.88882 0.0 11.2922    
cufflinks 4.76596 0.0 13.508    
cufflinks 4.38147 0.0 12.5435    
cufflinks 5.42516 0.0 15.1721    
cufflinks 3.28741 0.0 9.70528    
cufflinks 4.56797 0.0 13.0186    
cufflinks 1.09356 0.0 3.65023   Low
cufflinks 5.19728 0.0 14.5893    

0 Strain