Gene : Phvul.001G034100 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11034:SF23 - N-MYC DOWNREGULATED-LIKE 3 PROTEIN Genomic Order:  344
Name:  ? Phvul.001G034100 Secondary Identifier:  ? PAC:37168644
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G034100 0.5kb upstream 0.5kb upstream 5234 true Chr01: 3213815-3219048 Phaseolus vulgaris
Phvul.001G034100 0.5kb upstream 0.5kb upstream 500 false Chr01: 3213815-3214314 Phaseolus vulgaris
Phvul.001G034100 0.5kb downstream 0.5kb downstream 5234 true Chr01: 3214315-3219548 Phaseolus vulgaris
Phvul.001G034100 0.5kb downstream 0.5kb downstream 500 false Chr01: 3219049-3219548 Phaseolus vulgaris
Phvul.001G034100 1.0kb upstream 1.0kb upstream 5734 true Chr01: 3213315-3219048 Phaseolus vulgaris
Phvul.001G034100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3213315-3214314 Phaseolus vulgaris
Phvul.001G034100 1.0kb downstream 1.0kb downstream 5734 true Chr01: 3214315-3220048 Phaseolus vulgaris
Phvul.001G034100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3219049-3220048 Phaseolus vulgaris
Phvul.001G034100 2.0kb upstream 2.0kb upstream 6734 true Chr01: 3212315-3219048 Phaseolus vulgaris
Phvul.001G034100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3212315-3214314 Phaseolus vulgaris
Phvul.001G034100 2.0kb downstream 2.0kb downstream 6734 true Chr01: 3214315-3221048 Phaseolus vulgaris
Phvul.001G034100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3219049-3221048 Phaseolus vulgaris
Phvul.001G034100 5.0kb upstream 5.0kb upstream 9734 true Chr01: 3209315-3219048 Phaseolus vulgaris
Phvul.001G034100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3209315-3214314 Phaseolus vulgaris
Phvul.001G034100 5.0kb downstream 5.0kb downstream 9734 true Chr01: 3214315-3224048 Phaseolus vulgaris
Phvul.001G034100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3219049-3224048 Phaseolus vulgaris
Phvul.001G034100 10.0kb upstream 10.0kb upstream 14734 true Chr01: 3204315-3219048 Phaseolus vulgaris
Phvul.001G034100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3204315-3214314 Phaseolus vulgaris
Phvul.001G034100 10.0kb downstream 10.0kb downstream 14734 true Chr01: 3214315-3229048 Phaseolus vulgaris
Phvul.001G034100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3219049-3229048 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310930 5265 Fabidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75094 0.0 8.5318   Low
cufflinks 5.7052 0.0 16.3293    
cufflinks 8.87989 0.0 24.3337    
cufflinks 10.054 0.0 27.4438    
cufflinks 7.94987 0.0 22.1607    
cufflinks 11.6538 0.0 31.2786    
cufflinks 13.2039 0.0 35.0991   High
cufflinks 6.44459 0.0 18.1417    
cufflinks 8.60907 0.0 23.7744    
cufflinks 8.08156 0.0 22.4125    
cufflinks 10.2075 0.0 27.8159    

0 Strain