Gene : Phvul.001G032300 P. vulgaris v2.1
Defline:  (1 of 3) PF00331//PF02018 - Glycosyl hydrolase family 10 (Glyco_hydro_10) // Carbohydrate binding domain (CBM_4_9) Genomic Order:  326
Name:  ? Phvul.001G032300 Secondary Identifier:  ? PAC:37170289
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G032300 0.5kb upstream 0.5kb upstream 6558 true Chr01: 3029171-3035728 Phaseolus vulgaris
Phvul.001G032300 0.5kb upstream 0.5kb upstream 500 false Chr01: 3035229-3035728 Phaseolus vulgaris
Phvul.001G032300 0.5kb downstream 0.5kb downstream 6558 true Chr01: 3028671-3035228 Phaseolus vulgaris
Phvul.001G032300 0.5kb downstream 0.5kb downstream 500 false Chr01: 3028671-3029170 Phaseolus vulgaris
Phvul.001G032300 1.0kb upstream 1.0kb upstream 7058 true Chr01: 3029171-3036228 Phaseolus vulgaris
Phvul.001G032300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3035229-3036228 Phaseolus vulgaris
Phvul.001G032300 1.0kb downstream 1.0kb downstream 7058 true Chr01: 3028171-3035228 Phaseolus vulgaris
Phvul.001G032300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3028171-3029170 Phaseolus vulgaris
Phvul.001G032300 2.0kb upstream 2.0kb upstream 8058 true Chr01: 3029171-3037228 Phaseolus vulgaris
Phvul.001G032300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3035229-3037228 Phaseolus vulgaris
Phvul.001G032300 2.0kb downstream 2.0kb downstream 8058 true Chr01: 3027171-3035228 Phaseolus vulgaris
Phvul.001G032300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3027171-3029170 Phaseolus vulgaris
Phvul.001G032300 5.0kb upstream 5.0kb upstream 11058 true Chr01: 3029171-3040228 Phaseolus vulgaris
Phvul.001G032300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3035229-3040228 Phaseolus vulgaris
Phvul.001G032300 5.0kb downstream 5.0kb downstream 11058 true Chr01: 3024171-3035228 Phaseolus vulgaris
Phvul.001G032300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3024171-3029170 Phaseolus vulgaris
Phvul.001G032300 10.0kb upstream 10.0kb upstream 16058 true Chr01: 3029171-3045228 Phaseolus vulgaris
Phvul.001G032300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3035229-3045228 Phaseolus vulgaris
Phvul.001G032300 10.0kb downstream 10.0kb downstream 16058 true Chr01: 3019171-3035228 Phaseolus vulgaris
Phvul.001G032300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3019171-3029170 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303499 5265 Fabidae View MSA
124066828 5270 Rosid View MSA
123742236 5271 Pentapetalae View MSA
122786340 5272 Eudicot View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.83413 0.0 6.82952   Low
cufflinks 3.20317 0.0 10.7629    
cufflinks 8.70613 0.0 27.8324    
cufflinks 2.8466 0.0 9.62141   Low
cufflinks 15.1802 0.0 43.0033   High
cufflinks 6.18627 0.0 20.7144    
cufflinks 10.7814 0.0 35.6183    
cufflinks 6.02656 0.0 20.0964    
cufflinks 22.584 0.0 66.565   High
cufflinks 6.07689 0.0 18.2068    
cufflinks 13.1245 0.0 42.2616    

0 Strain