Gene : Phvul.001G035500 P. vulgaris v2.1
Defline:  (1 of 2) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  358
Name:  ? Phvul.001G035500 Secondary Identifier:  ? PAC:37170852
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLYCLEAV-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G035500 0.5kb upstream 0.5kb upstream 7600 true Chr01: 3319212-3326811 Phaseolus vulgaris
Phvul.001G035500 0.5kb upstream 0.5kb upstream 500 false Chr01: 3326312-3326811 Phaseolus vulgaris
Phvul.001G035500 0.5kb downstream 0.5kb downstream 7600 true Chr01: 3318712-3326311 Phaseolus vulgaris
Phvul.001G035500 0.5kb downstream 0.5kb downstream 500 false Chr01: 3318712-3319211 Phaseolus vulgaris
Phvul.001G035500 1.0kb upstream 1.0kb upstream 8100 true Chr01: 3319212-3327311 Phaseolus vulgaris
Phvul.001G035500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3326312-3327311 Phaseolus vulgaris
Phvul.001G035500 1.0kb downstream 1.0kb downstream 8100 true Chr01: 3318212-3326311 Phaseolus vulgaris
Phvul.001G035500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3318212-3319211 Phaseolus vulgaris
Phvul.001G035500 2.0kb upstream 2.0kb upstream 9100 true Chr01: 3319212-3328311 Phaseolus vulgaris
Phvul.001G035500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3326312-3328311 Phaseolus vulgaris
Phvul.001G035500 2.0kb downstream 2.0kb downstream 9100 true Chr01: 3317212-3326311 Phaseolus vulgaris
Phvul.001G035500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3317212-3319211 Phaseolus vulgaris
Phvul.001G035500 5.0kb upstream 5.0kb upstream 12100 true Chr01: 3319212-3331311 Phaseolus vulgaris
Phvul.001G035500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3326312-3331311 Phaseolus vulgaris
Phvul.001G035500 5.0kb downstream 5.0kb downstream 12100 true Chr01: 3314212-3326311 Phaseolus vulgaris
Phvul.001G035500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3314212-3319211 Phaseolus vulgaris
Phvul.001G035500 10.0kb upstream 10.0kb upstream 17100 true Chr01: 3319212-3336311 Phaseolus vulgaris
Phvul.001G035500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3326312-3336311 Phaseolus vulgaris
Phvul.001G035500 10.0kb downstream 10.0kb downstream 17100 true Chr01: 3309212-3326311 Phaseolus vulgaris
Phvul.001G035500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3309212-3319211 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304426 5265 Fabidae View MSA
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1851 0.0 55.9882   Low
cufflinks 51.4626 0.0 148.675 High  
cufflinks 727.539 0.0 3890.77 High High
cufflinks 32.2828 0.0 88.194   Low
cufflinks 102.163 0.0 326.392 High  
cufflinks 539.363 0.0 2632.58 High High
cufflinks 74.1261 0.0 226.036 High  
cufflinks 115.971 0.0 383.096 High  
cufflinks 79.7515 0.0 245.961 High  
cufflinks 117.422 0.0 386.157 High  
cufflinks 119.211 0.0 392.087 High  

0 Strain