Gene : Phvul.001G038600 P. vulgaris v2.1
Genomic Order:  458 Name:  ? Phvul.001G038600
Secondary Identifier:  ? PAC:37169850
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G038600 0.5kb upstream 0.5kb upstream 1914 true Chr01: 4622622-4624535 Phaseolus vulgaris
Phvul.001G038600 0.5kb upstream 0.5kb upstream 500 false Chr01: 4624036-4624535 Phaseolus vulgaris
Phvul.001G038600 0.5kb downstream 0.5kb downstream 1914 true Chr01: 4622122-4624035 Phaseolus vulgaris
Phvul.001G038600 0.5kb downstream 0.5kb downstream 500 false Chr01: 4622122-4622621 Phaseolus vulgaris
Phvul.001G038600 1.0kb upstream 1.0kb upstream 2414 true Chr01: 4622622-4625035 Phaseolus vulgaris
Phvul.001G038600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4624036-4625035 Phaseolus vulgaris
Phvul.001G038600 1.0kb downstream 1.0kb downstream 2414 true Chr01: 4621622-4624035 Phaseolus vulgaris
Phvul.001G038600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4621622-4622621 Phaseolus vulgaris
Phvul.001G038600 2.0kb upstream 2.0kb upstream 3414 true Chr01: 4622622-4626035 Phaseolus vulgaris
Phvul.001G038600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4624036-4626035 Phaseolus vulgaris
Phvul.001G038600 2.0kb downstream 2.0kb downstream 3414 true Chr01: 4620622-4624035 Phaseolus vulgaris
Phvul.001G038600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4620622-4622621 Phaseolus vulgaris
Phvul.001G038600 5.0kb upstream 5.0kb upstream 6414 true Chr01: 4622622-4629035 Phaseolus vulgaris
Phvul.001G038600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4624036-4629035 Phaseolus vulgaris
Phvul.001G038600 5.0kb downstream 5.0kb downstream 6414 true Chr01: 4617622-4624035 Phaseolus vulgaris
Phvul.001G038600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4617622-4622621 Phaseolus vulgaris
Phvul.001G038600 10.0kb upstream 10.0kb upstream 11414 true Chr01: 4622622-4634035 Phaseolus vulgaris
Phvul.001G038600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4624036-4634035 Phaseolus vulgaris
Phvul.001G038600 10.0kb downstream 10.0kb downstream 11414 true Chr01: 4612622-4624035 Phaseolus vulgaris
Phvul.001G038600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4612622-4622621 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309646 5265 Fabidae View MSA
124069293 5270 Rosid View MSA
123742144 5271 Pentapetalae View MSA
122795490 5272 Eudicot View MSA
122049393 5273 Angiosperm View MSA
121345648 5274 Embryophyte View MSA
123425550 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.269132 0.0 1.12619 Low  
cufflinks 0.331737 0.0 1.35698 Low  
cufflinks 0.0744525 0.0 0.369754 Low Low
cufflinks 0.542629 0.0 2.12532 Low High
cufflinks 0.620934 0.0 2.42186 Low High
cufflinks 0.169133 0.0 0.743104 Low  
cufflinks 0.241425 0.0 1.01965 Low  
cufflinks 0.0674903 0.0 0.332225 Low Low
cufflinks 0.107249 0.0 0.505966 Low  
cufflinks 0.128349 0.0 0.57955 Low  
cufflinks 0.411391 0.0 1.65503 Low  

0 Strain