Gene : Phvul.001G038800 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11748:SF17 - CYTOKININ DEHYDROGENASE 2-RELATED Genomic Order:  456
Name:  ? Phvul.001G038800 Secondary Identifier:  ? PAC:37169659
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G038800 0.5kb upstream 0.5kb upstream 4963 true Chr01: 4588096-4593058 Phaseolus vulgaris
Phvul.001G038800 0.5kb upstream 0.5kb upstream 500 false Chr01: 4588096-4588595 Phaseolus vulgaris
Phvul.001G038800 0.5kb downstream 0.5kb downstream 4963 true Chr01: 4588596-4593558 Phaseolus vulgaris
Phvul.001G038800 0.5kb downstream 0.5kb downstream 500 false Chr01: 4593059-4593558 Phaseolus vulgaris
Phvul.001G038800 1.0kb upstream 1.0kb upstream 5463 true Chr01: 4587596-4593058 Phaseolus vulgaris
Phvul.001G038800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4587596-4588595 Phaseolus vulgaris
Phvul.001G038800 1.0kb downstream 1.0kb downstream 5463 true Chr01: 4588596-4594058 Phaseolus vulgaris
Phvul.001G038800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4593059-4594058 Phaseolus vulgaris
Phvul.001G038800 2.0kb upstream 2.0kb upstream 6463 true Chr01: 4586596-4593058 Phaseolus vulgaris
Phvul.001G038800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4586596-4588595 Phaseolus vulgaris
Phvul.001G038800 2.0kb downstream 2.0kb downstream 6463 true Chr01: 4588596-4595058 Phaseolus vulgaris
Phvul.001G038800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4593059-4595058 Phaseolus vulgaris
Phvul.001G038800 5.0kb upstream 5.0kb upstream 9463 true Chr01: 4583596-4593058 Phaseolus vulgaris
Phvul.001G038800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4583596-4588595 Phaseolus vulgaris
Phvul.001G038800 5.0kb downstream 5.0kb downstream 9463 true Chr01: 4588596-4598058 Phaseolus vulgaris
Phvul.001G038800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4593059-4598058 Phaseolus vulgaris
Phvul.001G038800 10.0kb upstream 10.0kb upstream 14463 true Chr01: 4578596-4593058 Phaseolus vulgaris
Phvul.001G038800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4578596-4588595 Phaseolus vulgaris
Phvul.001G038800 10.0kb downstream 10.0kb downstream 14463 true Chr01: 4588596-4603058 Phaseolus vulgaris
Phvul.001G038800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4593059-4603058 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309624 5265 Fabidae View MSA
124065015 5270 Rosid View MSA
123739004 5271 Pentapetalae View MSA
122769941 5272 Eudicot View MSA
122041692 5273 Angiosperm View MSA
121309881 5274 Embryophyte View MSA
123347519 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.70818 0.0 23.3139    
cufflinks 14.5874 0.0 37.9254    
cufflinks 42.2654 0.0 111.387 High High
cufflinks 8.53528 0.0 22.7776    
cufflinks 22.1467 0.0 57.2761    
cufflinks 17.4986 0.0 45.2935    
cufflinks 4.29792 0.0 12.1353   Low
cufflinks 4.27425 0.0 12.1544   Low
cufflinks 2.31326 0.0 6.99898   Low
cufflinks 7.59187 0.0 20.5295    
cufflinks 21.6117 0.0 55.8844    

0 Strain