Gene : Phvul.001G039200 P. vulgaris v2.1
Defline:  (1 of 4) PTHR34455:SF1 - EXPRESSED PROTEIN Genomic Order:  452
Name:  ? Phvul.001G039200 Secondary Identifier:  ? PAC:37167820
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G039200 0.5kb upstream 0.5kb upstream 1142 true Chr01: 4509401-4510542 Phaseolus vulgaris
Phvul.001G039200 0.5kb upstream 0.5kb upstream 500 false Chr01: 4509401-4509900 Phaseolus vulgaris
Phvul.001G039200 0.5kb downstream 0.5kb downstream 1142 true Chr01: 4509901-4511042 Phaseolus vulgaris
Phvul.001G039200 0.5kb downstream 0.5kb downstream 500 false Chr01: 4510543-4511042 Phaseolus vulgaris
Phvul.001G039200 1.0kb upstream 1.0kb upstream 1642 true Chr01: 4508901-4510542 Phaseolus vulgaris
Phvul.001G039200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4508901-4509900 Phaseolus vulgaris
Phvul.001G039200 1.0kb downstream 1.0kb downstream 1642 true Chr01: 4509901-4511542 Phaseolus vulgaris
Phvul.001G039200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4510543-4511542 Phaseolus vulgaris
Phvul.001G039200 2.0kb upstream 2.0kb upstream 2642 true Chr01: 4507901-4510542 Phaseolus vulgaris
Phvul.001G039200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4507901-4509900 Phaseolus vulgaris
Phvul.001G039200 2.0kb downstream 2.0kb downstream 2642 true Chr01: 4509901-4512542 Phaseolus vulgaris
Phvul.001G039200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4510543-4512542 Phaseolus vulgaris
Phvul.001G039200 5.0kb upstream 5.0kb upstream 5642 true Chr01: 4504901-4510542 Phaseolus vulgaris
Phvul.001G039200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4504901-4509900 Phaseolus vulgaris
Phvul.001G039200 5.0kb downstream 5.0kb downstream 5642 true Chr01: 4509901-4515542 Phaseolus vulgaris
Phvul.001G039200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4510543-4515542 Phaseolus vulgaris
Phvul.001G039200 10.0kb upstream 10.0kb upstream 10642 true Chr01: 4499901-4510542 Phaseolus vulgaris
Phvul.001G039200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4499901-4509900 Phaseolus vulgaris
Phvul.001G039200 10.0kb downstream 10.0kb downstream 10642 true Chr01: 4509901-4520542 Phaseolus vulgaris
Phvul.001G039200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4510543-4520542 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657297 5273 Angiosperm View MSA
122250966 5265 Fabidae Singleton cluster - no MSA
124038868 5270 Rosid View MSA
123611024 5271 Pentapetalae View MSA
122645606 5272 Eudicot View MSA
120929342 5274 Embryophyte View MSA
122969909 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.9887 0.0 154.057 High  
cufflinks 119.109 0.0 308.562 High  
cufflinks 1778.0 0.0 6571.06 High High
cufflinks 84.8373 0.0 219.376 High  
cufflinks 138.699 0.0 360.369 High  
cufflinks 476.76 0.0 1377.15 High  
cufflinks 1.08953 0.0 4.19058   Low
cufflinks 2.28453 0.0 8.24757   Low
cufflinks 3.82965 0.0 13.1518   Low
cufflinks 97.8538 0.0 252.933 High  
cufflinks 85.3903 0.0 220.883 High  

0 Strain