Gene : Phvul.001G037100 P. vulgaris v2.1
Defline:  (1 of 2) 5.3.99.5 - Thromboxane-A synthase / Thromboxane synthetase Genomic Order:  374
Name:  ? Phvul.001G037100 Secondary Identifier:  ? PAC:37168719
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G037100 0.5kb upstream 0.5kb upstream 3908 true Chr01: 3485212-3489119 Phaseolus vulgaris
Phvul.001G037100 0.5kb upstream 0.5kb upstream 500 false Chr01: 3485212-3485711 Phaseolus vulgaris
Phvul.001G037100 0.5kb downstream 0.5kb downstream 3908 true Chr01: 3485712-3489619 Phaseolus vulgaris
Phvul.001G037100 0.5kb downstream 0.5kb downstream 500 false Chr01: 3489120-3489619 Phaseolus vulgaris
Phvul.001G037100 1.0kb upstream 1.0kb upstream 4408 true Chr01: 3484712-3489119 Phaseolus vulgaris
Phvul.001G037100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3484712-3485711 Phaseolus vulgaris
Phvul.001G037100 1.0kb downstream 1.0kb downstream 4408 true Chr01: 3485712-3490119 Phaseolus vulgaris
Phvul.001G037100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3489120-3490119 Phaseolus vulgaris
Phvul.001G037100 2.0kb upstream 2.0kb upstream 5408 true Chr01: 3483712-3489119 Phaseolus vulgaris
Phvul.001G037100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3483712-3485711 Phaseolus vulgaris
Phvul.001G037100 2.0kb downstream 2.0kb downstream 5408 true Chr01: 3485712-3491119 Phaseolus vulgaris
Phvul.001G037100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3489120-3491119 Phaseolus vulgaris
Phvul.001G037100 5.0kb upstream 5.0kb upstream 8408 true Chr01: 3480712-3489119 Phaseolus vulgaris
Phvul.001G037100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3480712-3485711 Phaseolus vulgaris
Phvul.001G037100 5.0kb downstream 5.0kb downstream 8408 true Chr01: 3485712-3494119 Phaseolus vulgaris
Phvul.001G037100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3489120-3494119 Phaseolus vulgaris
Phvul.001G037100 10.0kb upstream 10.0kb upstream 13408 true Chr01: 3475712-3489119 Phaseolus vulgaris
Phvul.001G037100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3475712-3485711 Phaseolus vulgaris
Phvul.001G037100 10.0kb downstream 10.0kb downstream 13408 true Chr01: 3485712-3499119 Phaseolus vulgaris
Phvul.001G037100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3489120-3499119 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311228 5265 Fabidae View MSA
124063797 5270 Rosid View MSA
123749479 5271 Pentapetalae View MSA
122792972 5272 Eudicot View MSA
122047544 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121347167 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0644372 0.0 0.287324 Low  
cufflinks 0.167472 0.0 0.693005 Low  
cufflinks 0.0428417 0.0 0.212192 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.591691 0.0 2.78715 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.13162 0.0 36.3978   High
cufflinks 3.28471 0.0 14.2805   High
cufflinks 2.04259 0.0 7.20922    
cufflinks 0.023124 0.0 0.126603 Low Low
cufflinks 0.371489 0.0 1.74636 Low  

0 Strain