Gene : Phvul.001G022700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31471:SF13 - REMORIN-LIKE PROTEIN Genomic Order:  230
Name:  ? Phvul.001G022700 Secondary Identifier:  ? PAC:37167696
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G022700 0.5kb upstream 0.5kb upstream 5924 true Chr01: 1876607-1882530 Phaseolus vulgaris
Phvul.001G022700 0.5kb upstream 0.5kb upstream 500 false Chr01: 1876607-1877106 Phaseolus vulgaris
Phvul.001G022700 0.5kb downstream 0.5kb downstream 5924 true Chr01: 1877107-1883030 Phaseolus vulgaris
Phvul.001G022700 0.5kb downstream 0.5kb downstream 500 false Chr01: 1882531-1883030 Phaseolus vulgaris
Phvul.001G022700 1.0kb upstream 1.0kb upstream 6424 true Chr01: 1876107-1882530 Phaseolus vulgaris
Phvul.001G022700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1876107-1877106 Phaseolus vulgaris
Phvul.001G022700 1.0kb downstream 1.0kb downstream 6424 true Chr01: 1877107-1883530 Phaseolus vulgaris
Phvul.001G022700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1882531-1883530 Phaseolus vulgaris
Phvul.001G022700 2.0kb upstream 2.0kb upstream 7424 true Chr01: 1875107-1882530 Phaseolus vulgaris
Phvul.001G022700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1875107-1877106 Phaseolus vulgaris
Phvul.001G022700 2.0kb downstream 2.0kb downstream 7424 true Chr01: 1877107-1884530 Phaseolus vulgaris
Phvul.001G022700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1882531-1884530 Phaseolus vulgaris
Phvul.001G022700 5.0kb upstream 5.0kb upstream 10424 true Chr01: 1872107-1882530 Phaseolus vulgaris
Phvul.001G022700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1872107-1877106 Phaseolus vulgaris
Phvul.001G022700 5.0kb downstream 5.0kb downstream 10424 true Chr01: 1877107-1887530 Phaseolus vulgaris
Phvul.001G022700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1882531-1887530 Phaseolus vulgaris
Phvul.001G022700 10.0kb upstream 10.0kb upstream 15424 true Chr01: 1867107-1882530 Phaseolus vulgaris
Phvul.001G022700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1867107-1877106 Phaseolus vulgaris
Phvul.001G022700 10.0kb downstream 10.0kb downstream 15424 true Chr01: 1877107-1892530 Phaseolus vulgaris
Phvul.001G022700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1882531-1892530 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303807 5265 Fabidae View MSA
124060988 5270 Rosid View MSA
123736964 5271 Pentapetalae View MSA
122788463 5272 Eudicot View MSA
122043924 5273 Angiosperm View MSA
121348920 5274 Embryophyte View MSA
123381079 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.47796 0.0 21.1247    
cufflinks 22.3351 0.0 63.9141   High
cufflinks 4.06443 0.0 12.6251    
cufflinks 4.7961 0.0 14.5475    
cufflinks 7.59098 0.0 23.903    
cufflinks 9.65035 0.0 27.1874    
cufflinks 4.54144 0.0 13.5318    
cufflinks 1.70089 0.0 5.39497   Low
cufflinks 7.56543 0.0 21.4604    
cufflinks 0.510516 0.0 3.548   Low
cufflinks 13.1579 0.0 37.0673    

0 Strain