Gene : Phvul.001G026300 P. vulgaris v2.1
Defline:  (1 of 1) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) Genomic Order:  266
Name:  ? Phvul.001G026300 Secondary Identifier:  ? PAC:37170280
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G026300 0.5kb upstream 0.5kb upstream 9670 true Chr01: 2302684-2312353 Phaseolus vulgaris
Phvul.001G026300 0.5kb upstream 0.5kb upstream 500 false Chr01: 2311854-2312353 Phaseolus vulgaris
Phvul.001G026300 0.5kb downstream 0.5kb downstream 9670 true Chr01: 2302184-2311853 Phaseolus vulgaris
Phvul.001G026300 0.5kb downstream 0.5kb downstream 500 false Chr01: 2302184-2302683 Phaseolus vulgaris
Phvul.001G026300 1.0kb upstream 1.0kb upstream 10170 true Chr01: 2302684-2312853 Phaseolus vulgaris
Phvul.001G026300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2311854-2312853 Phaseolus vulgaris
Phvul.001G026300 1.0kb downstream 1.0kb downstream 10170 true Chr01: 2301684-2311853 Phaseolus vulgaris
Phvul.001G026300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2301684-2302683 Phaseolus vulgaris
Phvul.001G026300 2.0kb upstream 2.0kb upstream 11170 true Chr01: 2302684-2313853 Phaseolus vulgaris
Phvul.001G026300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2311854-2313853 Phaseolus vulgaris
Phvul.001G026300 2.0kb downstream 2.0kb downstream 11170 true Chr01: 2300684-2311853 Phaseolus vulgaris
Phvul.001G026300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2300684-2302683 Phaseolus vulgaris
Phvul.001G026300 5.0kb upstream 5.0kb upstream 14170 true Chr01: 2302684-2316853 Phaseolus vulgaris
Phvul.001G026300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2311854-2316853 Phaseolus vulgaris
Phvul.001G026300 5.0kb downstream 5.0kb downstream 14170 true Chr01: 2297684-2311853 Phaseolus vulgaris
Phvul.001G026300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2297684-2302683 Phaseolus vulgaris
Phvul.001G026300 10.0kb upstream 10.0kb upstream 19170 true Chr01: 2302684-2321853 Phaseolus vulgaris
Phvul.001G026300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2311854-2321853 Phaseolus vulgaris
Phvul.001G026300 10.0kb downstream 10.0kb downstream 19170 true Chr01: 2292684-2311853 Phaseolus vulgaris
Phvul.001G026300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2292684-2302683 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303863 5265 Fabidae View MSA
124062302 5270 Rosid View MSA
123738111 5271 Pentapetalae View MSA
122789940 5272 Eudicot View MSA
122043785 5273 Angiosperm View MSA
121346006 5274 Embryophyte View MSA
123428499 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.76534 0.0 13.8943   Low
cufflinks 6.41323 0.0 21.4127    
cufflinks 9.15211 0.0 26.9464    
cufflinks 3.3843 0.0 11.226   Low
cufflinks 7.71603 0.0 23.08    
cufflinks 8.7062 0.0 28.0444    
cufflinks 13.0696 0.0 41.5235   High
cufflinks 11.9098 0.0 37.8272    
cufflinks 10.4693 0.0 29.7145    
cufflinks 12.5395 0.0 39.837   High
cufflinks 6.6596 0.0 20.0484    

0 Strain