Gene : Phvul.001G027200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11743//PTHR11743:SF32 - VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  275
Name:  ? Phvul.001G027200 Secondary Identifier:  ? PAC:37169614
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G027200 0.5kb upstream 0.5kb upstream 3001 true Chr01: 2417577-2420577 Phaseolus vulgaris
Phvul.001G027200 0.5kb upstream 0.5kb upstream 500 false Chr01: 2420078-2420577 Phaseolus vulgaris
Phvul.001G027200 0.5kb downstream 0.5kb downstream 3001 true Chr01: 2417077-2420077 Phaseolus vulgaris
Phvul.001G027200 0.5kb downstream 0.5kb downstream 500 false Chr01: 2417077-2417576 Phaseolus vulgaris
Phvul.001G027200 1.0kb upstream 1.0kb upstream 3501 true Chr01: 2417577-2421077 Phaseolus vulgaris
Phvul.001G027200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2420078-2421077 Phaseolus vulgaris
Phvul.001G027200 1.0kb downstream 1.0kb downstream 3501 true Chr01: 2416577-2420077 Phaseolus vulgaris
Phvul.001G027200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2416577-2417576 Phaseolus vulgaris
Phvul.001G027200 2.0kb upstream 2.0kb upstream 4501 true Chr01: 2417577-2422077 Phaseolus vulgaris
Phvul.001G027200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2420078-2422077 Phaseolus vulgaris
Phvul.001G027200 2.0kb downstream 2.0kb downstream 4501 true Chr01: 2415577-2420077 Phaseolus vulgaris
Phvul.001G027200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2415577-2417576 Phaseolus vulgaris
Phvul.001G027200 5.0kb upstream 5.0kb upstream 7501 true Chr01: 2417577-2425077 Phaseolus vulgaris
Phvul.001G027200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2420078-2425077 Phaseolus vulgaris
Phvul.001G027200 5.0kb downstream 5.0kb downstream 7501 true Chr01: 2412577-2420077 Phaseolus vulgaris
Phvul.001G027200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2412577-2417576 Phaseolus vulgaris
Phvul.001G027200 10.0kb upstream 10.0kb upstream 12501 true Chr01: 2417577-2430077 Phaseolus vulgaris
Phvul.001G027200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2420078-2430077 Phaseolus vulgaris
Phvul.001G027200 10.0kb downstream 10.0kb downstream 12501 true Chr01: 2407577-2420077 Phaseolus vulgaris
Phvul.001G027200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2407577-2417576 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303381 5265 Fabidae View MSA
124068331 5270 Rosid View MSA
123741801 5271 Pentapetalae View MSA
122791027 5272 Eudicot View MSA
122043452 5273 Angiosperm View MSA
121349603 5274 Embryophyte View MSA
123426124 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.10725 0.0 12.829    
cufflinks 4.74549 0.0 14.6315   High
cufflinks 2.26915 0.0 7.57506   Low
cufflinks 3.74866 0.0 11.9474    
cufflinks 3.12446 0.0 10.1366    
cufflinks 1.94676 0.0 6.63502   Low
cufflinks 4.12491 0.0 12.9409    
cufflinks 4.49539 0.0 13.9009   High
cufflinks 2.85371 0.0 9.36633    
cufflinks 3.16999 0.0 10.2298    
cufflinks 2.83324 0.0 9.30176    

0 Strain