Gene : Phvul.001G024600 P. vulgaris v2.1
Defline:  (1 of 1) K09660 - mannose-P-dolichol utilization defect 1 (MPDU1) Genomic Order:  249
Name:  ? Phvul.001G024600 Secondary Identifier:  ? PAC:37170005
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G024600 0.5kb upstream 0.5kb upstream 6452 true Chr01: 2091811-2098262 Phaseolus vulgaris
Phvul.001G024600 0.5kb upstream 0.5kb upstream 500 false Chr01: 2091811-2092310 Phaseolus vulgaris
Phvul.001G024600 0.5kb downstream 0.5kb downstream 6452 true Chr01: 2092311-2098762 Phaseolus vulgaris
Phvul.001G024600 0.5kb downstream 0.5kb downstream 500 false Chr01: 2098263-2098762 Phaseolus vulgaris
Phvul.001G024600 1.0kb upstream 1.0kb upstream 6952 true Chr01: 2091311-2098262 Phaseolus vulgaris
Phvul.001G024600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2091311-2092310 Phaseolus vulgaris
Phvul.001G024600 1.0kb downstream 1.0kb downstream 6952 true Chr01: 2092311-2099262 Phaseolus vulgaris
Phvul.001G024600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2098263-2099262 Phaseolus vulgaris
Phvul.001G024600 2.0kb upstream 2.0kb upstream 7952 true Chr01: 2090311-2098262 Phaseolus vulgaris
Phvul.001G024600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2090311-2092310 Phaseolus vulgaris
Phvul.001G024600 2.0kb downstream 2.0kb downstream 7952 true Chr01: 2092311-2100262 Phaseolus vulgaris
Phvul.001G024600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2098263-2100262 Phaseolus vulgaris
Phvul.001G024600 5.0kb upstream 5.0kb upstream 10952 true Chr01: 2087311-2098262 Phaseolus vulgaris
Phvul.001G024600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2087311-2092310 Phaseolus vulgaris
Phvul.001G024600 5.0kb downstream 5.0kb downstream 10952 true Chr01: 2092311-2103262 Phaseolus vulgaris
Phvul.001G024600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2098263-2103262 Phaseolus vulgaris
Phvul.001G024600 10.0kb upstream 10.0kb upstream 15952 true Chr01: 2082311-2098262 Phaseolus vulgaris
Phvul.001G024600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2082311-2092310 Phaseolus vulgaris
Phvul.001G024600 10.0kb downstream 10.0kb downstream 15952 true Chr01: 2092311-2108262 Phaseolus vulgaris
Phvul.001G024600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2098263-2108262 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026177 5273 Angiosperm View MSA
122303925 5265 Fabidae View MSA
124060933 5270 Rosid View MSA
123748760 5271 Pentapetalae View MSA
122789480 5272 Eudicot View MSA
121343943 5274 Embryophyte View MSA
123424211 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.4775 0.0 74.599    
cufflinks 26.3488 0.0 69.3819    
cufflinks 20.0053 0.0 53.6259   Low
cufflinks 34.9968 0.0 90.9516 High High
cufflinks 26.1981 0.0 69.171    
cufflinks 21.4609 0.0 57.2886   Low
cufflinks 25.3086 0.0 66.7865    
cufflinks 25.7999 0.0 67.8156    
cufflinks 29.7565 0.0 77.9108    
cufflinks 27.8364 0.0 73.0664    
cufflinks 31.7902 0.0 83.0547   High

0 Strain