Gene : Phvul.001G025600 P. vulgaris v2.1
Defline:  (1 of 5) PTHR10177:SF100 - CYCLIN-A3-2-RELATED Genomic Order:  259
Name:  ? Phvul.001G025600 Secondary Identifier:  ? PAC:37170625
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G025600 0.5kb upstream 0.5kb upstream 4587 true Chr01: 2217928-2222514 Phaseolus vulgaris
Phvul.001G025600 0.5kb upstream 0.5kb upstream 500 false Chr01: 2222015-2222514 Phaseolus vulgaris
Phvul.001G025600 0.5kb downstream 0.5kb downstream 4587 true Chr01: 2217428-2222014 Phaseolus vulgaris
Phvul.001G025600 0.5kb downstream 0.5kb downstream 500 false Chr01: 2217428-2217927 Phaseolus vulgaris
Phvul.001G025600 1.0kb upstream 1.0kb upstream 5087 true Chr01: 2217928-2223014 Phaseolus vulgaris
Phvul.001G025600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2222015-2223014 Phaseolus vulgaris
Phvul.001G025600 1.0kb downstream 1.0kb downstream 5087 true Chr01: 2216928-2222014 Phaseolus vulgaris
Phvul.001G025600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2216928-2217927 Phaseolus vulgaris
Phvul.001G025600 2.0kb upstream 2.0kb upstream 6087 true Chr01: 2217928-2224014 Phaseolus vulgaris
Phvul.001G025600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2222015-2224014 Phaseolus vulgaris
Phvul.001G025600 2.0kb downstream 2.0kb downstream 6087 true Chr01: 2215928-2222014 Phaseolus vulgaris
Phvul.001G025600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2215928-2217927 Phaseolus vulgaris
Phvul.001G025600 5.0kb upstream 5.0kb upstream 9087 true Chr01: 2217928-2227014 Phaseolus vulgaris
Phvul.001G025600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2222015-2227014 Phaseolus vulgaris
Phvul.001G025600 5.0kb downstream 5.0kb downstream 9087 true Chr01: 2212928-2222014 Phaseolus vulgaris
Phvul.001G025600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2212928-2217927 Phaseolus vulgaris
Phvul.001G025600 10.0kb upstream 10.0kb upstream 14087 true Chr01: 2217928-2232014 Phaseolus vulgaris
Phvul.001G025600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2222015-2232014 Phaseolus vulgaris
Phvul.001G025600 10.0kb downstream 10.0kb downstream 14087 true Chr01: 2207928-2222014 Phaseolus vulgaris
Phvul.001G025600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2207928-2217927 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299886 5265 Fabidae View MSA
124066944 5270 Rosid View MSA
123741771 5271 Pentapetalae View MSA
122792448 5272 Eudicot View MSA
122043668 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349586 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.60259 0.0 11.3392    
cufflinks 6.89345 0.0 26.7754   High
cufflinks 4.38236 0.0 19.1925    
cufflinks 3.77542 0.0 14.3053    
cufflinks 4.90659 0.0 21.1466    
cufflinks 8.31814 0.0 31.1735   High
cufflinks 3.52553 0.0 14.1896    
cufflinks 4.69516 0.0 20.4481    
cufflinks 4.23741 0.0 16.1711    
cufflinks 1.92386 0.0 9.03965   Low
cufflinks 4.90117 0.0 20.8831    

0 Strain