Gene : Phvul.001G026000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR19957//PTHR19957:SF118 - SYNTAXIN // SUBFAMILY NOT NAMED Genomic Order:  263
Name:  ? Phvul.001G026000 Secondary Identifier:  ? PAC:37168562
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G026000 0.5kb upstream 0.5kb upstream 3159 true Chr01: 2278972-2282130 Phaseolus vulgaris
Phvul.001G026000 0.5kb upstream 0.5kb upstream 500 false Chr01: 2281631-2282130 Phaseolus vulgaris
Phvul.001G026000 0.5kb downstream 0.5kb downstream 3159 true Chr01: 2278472-2281630 Phaseolus vulgaris
Phvul.001G026000 0.5kb downstream 0.5kb downstream 500 false Chr01: 2278472-2278971 Phaseolus vulgaris
Phvul.001G026000 1.0kb upstream 1.0kb upstream 3659 true Chr01: 2278972-2282630 Phaseolus vulgaris
Phvul.001G026000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2281631-2282630 Phaseolus vulgaris
Phvul.001G026000 1.0kb downstream 1.0kb downstream 3659 true Chr01: 2277972-2281630 Phaseolus vulgaris
Phvul.001G026000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2277972-2278971 Phaseolus vulgaris
Phvul.001G026000 2.0kb upstream 2.0kb upstream 4659 true Chr01: 2278972-2283630 Phaseolus vulgaris
Phvul.001G026000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2281631-2283630 Phaseolus vulgaris
Phvul.001G026000 2.0kb downstream 2.0kb downstream 4659 true Chr01: 2276972-2281630 Phaseolus vulgaris
Phvul.001G026000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2276972-2278971 Phaseolus vulgaris
Phvul.001G026000 5.0kb upstream 5.0kb upstream 7659 true Chr01: 2278972-2286630 Phaseolus vulgaris
Phvul.001G026000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2281631-2286630 Phaseolus vulgaris
Phvul.001G026000 5.0kb downstream 5.0kb downstream 7659 true Chr01: 2273972-2281630 Phaseolus vulgaris
Phvul.001G026000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2273972-2278971 Phaseolus vulgaris
Phvul.001G026000 10.0kb upstream 10.0kb upstream 12659 true Chr01: 2278972-2291630 Phaseolus vulgaris
Phvul.001G026000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2281631-2291630 Phaseolus vulgaris
Phvul.001G026000 10.0kb downstream 10.0kb downstream 12659 true Chr01: 2268972-2281630 Phaseolus vulgaris
Phvul.001G026000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2268972-2278971 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309285 5265 Fabidae View MSA
124064346 5270 Rosid View MSA
123743910 5271 Pentapetalae View MSA
122788324 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.44054 0.0 20.7718    
cufflinks 10.0533 0.0 27.3354    
cufflinks 29.1597 0.0 75.3723   High
cufflinks 6.07905 0.0 17.4343   Low
cufflinks 8.78241 0.0 24.3927    
cufflinks 15.177 0.0 39.997    
cufflinks 11.48 0.0 30.8023    
cufflinks 8.44784 0.0 23.1874    
cufflinks 10.3829 0.0 28.1229    
cufflinks 7.34756 0.0 20.5863    
cufflinks 7.42476 0.0 20.8421    

0 Strain