Gene : Phvul.001G025900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31300:SF7 - LIPASE-RELATED Genomic Order:  262
Name:  ? Phvul.001G025900 Secondary Identifier:  ? PAC:37169232
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G025900 0.5kb upstream 0.5kb upstream 3375 true Chr01: 2269265-2272639 Phaseolus vulgaris
Phvul.001G025900 0.5kb upstream 0.5kb upstream 500 false Chr01: 2269265-2269764 Phaseolus vulgaris
Phvul.001G025900 0.5kb downstream 0.5kb downstream 3375 true Chr01: 2269765-2273139 Phaseolus vulgaris
Phvul.001G025900 0.5kb downstream 0.5kb downstream 500 false Chr01: 2272640-2273139 Phaseolus vulgaris
Phvul.001G025900 1.0kb upstream 1.0kb upstream 3875 true Chr01: 2268765-2272639 Phaseolus vulgaris
Phvul.001G025900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2268765-2269764 Phaseolus vulgaris
Phvul.001G025900 1.0kb downstream 1.0kb downstream 3875 true Chr01: 2269765-2273639 Phaseolus vulgaris
Phvul.001G025900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2272640-2273639 Phaseolus vulgaris
Phvul.001G025900 2.0kb upstream 2.0kb upstream 4875 true Chr01: 2267765-2272639 Phaseolus vulgaris
Phvul.001G025900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2267765-2269764 Phaseolus vulgaris
Phvul.001G025900 2.0kb downstream 2.0kb downstream 4875 true Chr01: 2269765-2274639 Phaseolus vulgaris
Phvul.001G025900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2272640-2274639 Phaseolus vulgaris
Phvul.001G025900 5.0kb upstream 5.0kb upstream 7875 true Chr01: 2264765-2272639 Phaseolus vulgaris
Phvul.001G025900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2264765-2269764 Phaseolus vulgaris
Phvul.001G025900 5.0kb downstream 5.0kb downstream 7875 true Chr01: 2269765-2277639 Phaseolus vulgaris
Phvul.001G025900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2272640-2277639 Phaseolus vulgaris
Phvul.001G025900 10.0kb upstream 10.0kb upstream 12875 true Chr01: 2259765-2272639 Phaseolus vulgaris
Phvul.001G025900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2259765-2269764 Phaseolus vulgaris
Phvul.001G025900 10.0kb downstream 10.0kb downstream 12875 true Chr01: 2269765-2282639 Phaseolus vulgaris
Phvul.001G025900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2272640-2282639 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302426 5265 Fabidae View MSA
124070332 5270 Rosid View MSA
123742255 5271 Pentapetalae View MSA
122789434 5272 Eudicot View MSA
122043427 5273 Angiosperm View MSA
121310121 5274 Embryophyte View MSA
123347696 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.42222 0.0 12.2442   Low
cufflinks 13.2986 0.0 34.4234    
cufflinks 11.5805 0.0 30.0811    
cufflinks 13.6861 0.0 35.4058    
cufflinks 13.7812 0.0 35.6441    
cufflinks 17.9285 0.0 46.3729   High
cufflinks 10.0673 0.0 26.2089    
cufflinks 12.3231 0.0 31.9427    
cufflinks 12.2906 0.0 31.8396    
cufflinks 14.3547 0.0 37.1197    
cufflinks 15.9756 0.0 41.296    

0 Strain