Gene : Phvul.001G028700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11119:SF52 - NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED Genomic Order:  289
Name:  ? Phvul.001G028700 Secondary Identifier:  ? PAC:37171021
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G028700 0.5kb upstream 0.5kb upstream 5043 true Chr01: 2544472-2549514 Phaseolus vulgaris
Phvul.001G028700 0.5kb upstream 0.5kb upstream 500 false Chr01: 2544472-2544971 Phaseolus vulgaris
Phvul.001G028700 0.5kb downstream 0.5kb downstream 5043 true Chr01: 2544972-2550014 Phaseolus vulgaris
Phvul.001G028700 0.5kb downstream 0.5kb downstream 500 false Chr01: 2549515-2550014 Phaseolus vulgaris
Phvul.001G028700 1.0kb upstream 1.0kb upstream 5543 true Chr01: 2543972-2549514 Phaseolus vulgaris
Phvul.001G028700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2543972-2544971 Phaseolus vulgaris
Phvul.001G028700 1.0kb downstream 1.0kb downstream 5543 true Chr01: 2544972-2550514 Phaseolus vulgaris
Phvul.001G028700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2549515-2550514 Phaseolus vulgaris
Phvul.001G028700 2.0kb upstream 2.0kb upstream 6543 true Chr01: 2542972-2549514 Phaseolus vulgaris
Phvul.001G028700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2542972-2544971 Phaseolus vulgaris
Phvul.001G028700 2.0kb downstream 2.0kb downstream 6543 true Chr01: 2544972-2551514 Phaseolus vulgaris
Phvul.001G028700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2549515-2551514 Phaseolus vulgaris
Phvul.001G028700 5.0kb upstream 5.0kb upstream 9543 true Chr01: 2539972-2549514 Phaseolus vulgaris
Phvul.001G028700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2539972-2544971 Phaseolus vulgaris
Phvul.001G028700 5.0kb downstream 5.0kb downstream 9543 true Chr01: 2544972-2554514 Phaseolus vulgaris
Phvul.001G028700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2549515-2554514 Phaseolus vulgaris
Phvul.001G028700 10.0kb upstream 10.0kb upstream 14543 true Chr01: 2534972-2549514 Phaseolus vulgaris
Phvul.001G028700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2534972-2544971 Phaseolus vulgaris
Phvul.001G028700 10.0kb downstream 10.0kb downstream 14543 true Chr01: 2544972-2559514 Phaseolus vulgaris
Phvul.001G028700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2549515-2559514 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779215 5273 Angiosperm View MSA
122300601 5265 Fabidae View MSA
124071699 5270 Rosid View MSA
123740859 5271 Pentapetalae View MSA
122769992 5272 Eudicot View MSA
121050893 5274 Embryophyte View MSA
123091005 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.035858 0.0 0.16505 Low Low
cufflinks 0.185511 0.0 0.73711 Low  
cufflinks 0.153328 0.0 0.617284 Low  
cufflinks 0.143198 0.0 0.584375 Low  
cufflinks 0.30815 0.0 1.17994 Low  
cufflinks 0.420554 0.0 1.56663 Low  
cufflinks 2.60221 0.0 8.0136   High
cufflinks 34.6071 0.0 89.9709 High High
cufflinks 0.0689132 0.0 0.299286 Low  
cufflinks 0.0942385 0.0 0.395818 Low  
cufflinks 0.147203 0.0 0.596884 Low  

0 Strain