Gene : Phvul.001G028800 P. vulgaris v2.1
Genomic Order:  290 Name:  ? Phvul.001G028800
Secondary Identifier:  ? PAC:37169534
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G028800 0.5kb upstream 0.5kb upstream 3221 true Chr01: 2560926-2564146 Phaseolus vulgaris
Phvul.001G028800 0.5kb upstream 0.5kb upstream 500 false Chr01: 2560926-2561425 Phaseolus vulgaris
Phvul.001G028800 0.5kb downstream 0.5kb downstream 3221 true Chr01: 2561426-2564646 Phaseolus vulgaris
Phvul.001G028800 0.5kb downstream 0.5kb downstream 500 false Chr01: 2564147-2564646 Phaseolus vulgaris
Phvul.001G028800 1.0kb upstream 1.0kb upstream 3721 true Chr01: 2560426-2564146 Phaseolus vulgaris
Phvul.001G028800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2560426-2561425 Phaseolus vulgaris
Phvul.001G028800 1.0kb downstream 1.0kb downstream 3721 true Chr01: 2561426-2565146 Phaseolus vulgaris
Phvul.001G028800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2564147-2565146 Phaseolus vulgaris
Phvul.001G028800 2.0kb upstream 2.0kb upstream 4721 true Chr01: 2559426-2564146 Phaseolus vulgaris
Phvul.001G028800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2559426-2561425 Phaseolus vulgaris
Phvul.001G028800 2.0kb downstream 2.0kb downstream 4721 true Chr01: 2561426-2566146 Phaseolus vulgaris
Phvul.001G028800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2564147-2566146 Phaseolus vulgaris
Phvul.001G028800 5.0kb upstream 5.0kb upstream 7721 true Chr01: 2556426-2564146 Phaseolus vulgaris
Phvul.001G028800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2556426-2561425 Phaseolus vulgaris
Phvul.001G028800 5.0kb downstream 5.0kb downstream 7721 true Chr01: 2561426-2569146 Phaseolus vulgaris
Phvul.001G028800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2564147-2569146 Phaseolus vulgaris
Phvul.001G028800 10.0kb upstream 10.0kb upstream 12721 true Chr01: 2551426-2564146 Phaseolus vulgaris
Phvul.001G028800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2551426-2561425 Phaseolus vulgaris
Phvul.001G028800 10.0kb downstream 10.0kb downstream 12721 true Chr01: 2561426-2574146 Phaseolus vulgaris
Phvul.001G028800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2564147-2574146 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041442 5273 Angiosperm View MSA
122296954 5265 Fabidae View MSA
124069670 5270 Rosid View MSA
123751120 5271 Pentapetalae View MSA
122785987 5272 Eudicot View MSA
121309846 5274 Embryophyte View MSA
123347492 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.92402 0.0 5.99884    
cufflinks 2.9754 0.0 8.81717    
cufflinks 3.5685 0.0 10.2987    
cufflinks 1.6672 0.0 5.35693    
cufflinks 1.26811 0.0 4.19033    
cufflinks 4.69477 0.0 13.2338    
cufflinks 2.74463 0.0 8.18689    
cufflinks 16.4323 0.0 42.5098   High
cufflinks 0.364623 0.0 1.35401 Low Low
cufflinks 0.386572 0.0 1.43118   Low
cufflinks 1.32234 0.0 4.32923    

0 Strain