Gene : Phvul.001G031800 P. vulgaris v2.1
Genomic Order:  320 Name:  ? Phvul.001G031800
Secondary Identifier:  ? PAC:37167918
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G031800 0.5kb upstream 0.5kb upstream 4703 true Chr01: 2897210-2901912 Phaseolus vulgaris
Phvul.001G031800 0.5kb upstream 0.5kb upstream 500 false Chr01: 2897210-2897709 Phaseolus vulgaris
Phvul.001G031800 0.5kb downstream 0.5kb downstream 4703 true Chr01: 2897710-2902412 Phaseolus vulgaris
Phvul.001G031800 0.5kb downstream 0.5kb downstream 500 false Chr01: 2901913-2902412 Phaseolus vulgaris
Phvul.001G031800 1.0kb upstream 1.0kb upstream 5203 true Chr01: 2896710-2901912 Phaseolus vulgaris
Phvul.001G031800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2896710-2897709 Phaseolus vulgaris
Phvul.001G031800 1.0kb downstream 1.0kb downstream 5203 true Chr01: 2897710-2902912 Phaseolus vulgaris
Phvul.001G031800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2901913-2902912 Phaseolus vulgaris
Phvul.001G031800 2.0kb upstream 2.0kb upstream 6203 true Chr01: 2895710-2901912 Phaseolus vulgaris
Phvul.001G031800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2895710-2897709 Phaseolus vulgaris
Phvul.001G031800 2.0kb downstream 2.0kb downstream 6203 true Chr01: 2897710-2903912 Phaseolus vulgaris
Phvul.001G031800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2901913-2903912 Phaseolus vulgaris
Phvul.001G031800 5.0kb upstream 5.0kb upstream 9203 true Chr01: 2892710-2901912 Phaseolus vulgaris
Phvul.001G031800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2892710-2897709 Phaseolus vulgaris
Phvul.001G031800 5.0kb downstream 5.0kb downstream 9203 true Chr01: 2897710-2906912 Phaseolus vulgaris
Phvul.001G031800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2901913-2906912 Phaseolus vulgaris
Phvul.001G031800 10.0kb upstream 10.0kb upstream 14203 true Chr01: 2887710-2901912 Phaseolus vulgaris
Phvul.001G031800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2887710-2897709 Phaseolus vulgaris
Phvul.001G031800 10.0kb downstream 10.0kb downstream 14203 true Chr01: 2897710-2911912 Phaseolus vulgaris
Phvul.001G031800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2901913-2911912 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297478 5265 Fabidae View MSA
124071279 5270 Rosid View MSA
123741561 5271 Pentapetalae View MSA
122793729 5272 Eudicot View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.76832 0.0 22.256   Low
cufflinks 11.8326 0.0 32.6097    
cufflinks 15.3608 0.0 41.4485    
cufflinks 25.7489 0.0 67.4463   High
cufflinks 16.1696 0.0 43.6956    
cufflinks 19.0689 0.0 50.5627    
cufflinks 15.7496 0.0 42.3453    
cufflinks 17.4238 0.0 46.3514    
cufflinks 17.3934 0.0 46.55    
cufflinks 7.67554 0.0 22.034   Low
cufflinks 19.3839 0.0 51.4896    

0 Strain