Gene : Phvul.001G032100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10641:SF519 - TRANSCRIPTION FACTOR RAX2 Genomic Order:  323
Name:  ? Phvul.001G032100 Secondary Identifier:  ? PAC:37170078
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G032100 0.5kb upstream 0.5kb upstream 2618 true Chr01: 2926823-2929440 Phaseolus vulgaris
Phvul.001G032100 0.5kb upstream 0.5kb upstream 500 false Chr01: 2928941-2929440 Phaseolus vulgaris
Phvul.001G032100 0.5kb downstream 0.5kb downstream 2618 true Chr01: 2926323-2928940 Phaseolus vulgaris
Phvul.001G032100 0.5kb downstream 0.5kb downstream 500 false Chr01: 2926323-2926822 Phaseolus vulgaris
Phvul.001G032100 1.0kb upstream 1.0kb upstream 3118 true Chr01: 2926823-2929940 Phaseolus vulgaris
Phvul.001G032100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2928941-2929940 Phaseolus vulgaris
Phvul.001G032100 1.0kb downstream 1.0kb downstream 3118 true Chr01: 2925823-2928940 Phaseolus vulgaris
Phvul.001G032100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2925823-2926822 Phaseolus vulgaris
Phvul.001G032100 2.0kb upstream 2.0kb upstream 4118 true Chr01: 2926823-2930940 Phaseolus vulgaris
Phvul.001G032100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2928941-2930940 Phaseolus vulgaris
Phvul.001G032100 2.0kb downstream 2.0kb downstream 4118 true Chr01: 2924823-2928940 Phaseolus vulgaris
Phvul.001G032100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2924823-2926822 Phaseolus vulgaris
Phvul.001G032100 5.0kb upstream 5.0kb upstream 7118 true Chr01: 2926823-2933940 Phaseolus vulgaris
Phvul.001G032100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2928941-2933940 Phaseolus vulgaris
Phvul.001G032100 5.0kb downstream 5.0kb downstream 7118 true Chr01: 2921823-2928940 Phaseolus vulgaris
Phvul.001G032100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2921823-2926822 Phaseolus vulgaris
Phvul.001G032100 10.0kb upstream 10.0kb upstream 12118 true Chr01: 2926823-2938940 Phaseolus vulgaris
Phvul.001G032100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2928941-2938940 Phaseolus vulgaris
Phvul.001G032100 10.0kb downstream 10.0kb downstream 12118 true Chr01: 2916823-2928940 Phaseolus vulgaris
Phvul.001G032100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2916823-2926822 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311579 5265 Fabidae View MSA
124071714 5270 Rosid View MSA
123746695 5271 Pentapetalae View MSA
122790538 5272 Eudicot View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.19611 0.0 4.11653    
cufflinks 0.626746 0.0 2.29692    
cufflinks 0.687896 0.0 2.49645    
cufflinks 0.540985 0.0 2.01057 Low  
cufflinks 1.15697 0.0 4.02657    
cufflinks 5.39365 0.0 15.6043   High
cufflinks 3.22121 0.0 9.8667    
cufflinks 4.00046 0.0 11.9136    
cufflinks 4.61207 0.0 13.5315    
cufflinks 0.0476584 0.0 0.218555 Low Low
cufflinks 1.54108 0.0 5.17978    

0 Strain