Gene : Phvul.001G032200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  325
Name:  ? Phvul.001G032200 Secondary Identifier:  ? PAC:37168886
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G032200 0.5kb upstream 0.5kb upstream 6210 true Chr01: 2986015-2992224 Phaseolus vulgaris
Phvul.001G032200 0.5kb upstream 0.5kb upstream 500 false Chr01: 2991725-2992224 Phaseolus vulgaris
Phvul.001G032200 0.5kb downstream 0.5kb downstream 6210 true Chr01: 2985515-2991724 Phaseolus vulgaris
Phvul.001G032200 0.5kb downstream 0.5kb downstream 500 false Chr01: 2985515-2986014 Phaseolus vulgaris
Phvul.001G032200 1.0kb upstream 1.0kb upstream 6710 true Chr01: 2986015-2992724 Phaseolus vulgaris
Phvul.001G032200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2991725-2992724 Phaseolus vulgaris
Phvul.001G032200 1.0kb downstream 1.0kb downstream 6710 true Chr01: 2985015-2991724 Phaseolus vulgaris
Phvul.001G032200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2985015-2986014 Phaseolus vulgaris
Phvul.001G032200 2.0kb upstream 2.0kb upstream 7710 true Chr01: 2986015-2993724 Phaseolus vulgaris
Phvul.001G032200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2991725-2993724 Phaseolus vulgaris
Phvul.001G032200 2.0kb downstream 2.0kb downstream 7710 true Chr01: 2984015-2991724 Phaseolus vulgaris
Phvul.001G032200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2984015-2986014 Phaseolus vulgaris
Phvul.001G032200 5.0kb upstream 5.0kb upstream 10710 true Chr01: 2986015-2996724 Phaseolus vulgaris
Phvul.001G032200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2991725-2996724 Phaseolus vulgaris
Phvul.001G032200 5.0kb downstream 5.0kb downstream 10710 true Chr01: 2981015-2991724 Phaseolus vulgaris
Phvul.001G032200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2981015-2986014 Phaseolus vulgaris
Phvul.001G032200 10.0kb upstream 10.0kb upstream 15710 true Chr01: 2986015-3001724 Phaseolus vulgaris
Phvul.001G032200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2991725-3001724 Phaseolus vulgaris
Phvul.001G032200 10.0kb downstream 10.0kb downstream 15710 true Chr01: 2976015-2991724 Phaseolus vulgaris
Phvul.001G032200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2976015-2986014 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301838 5265 Fabidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.86772 0.0 8.44689    
cufflinks 0.645895 0.0 3.82353    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.23975 0.0 4.94923    
cufflinks 66.1976 0.0 203.819 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.7236 0.0 48.9408    
cufflinks 4.89266 0.0 17.026    
cufflinks 4.03519 0.0 14.7636    
cufflinks 0.0210935 0.0 0.126474 Low Low
cufflinks 108.05 0.0 366.591 High High

0 Strain