Gene : Phvul.001G030300 P. vulgaris v2.1
Defline:  (1 of 3) K02739 - 20S proteasome subunit beta 2 (PSMB7) Genomic Order:  305
Name:  ? Phvul.001G030300 Secondary Identifier:  ? PAC:37169230
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G030300 0.5kb upstream 0.5kb upstream 4307 true Chr01: 2679946-2684252 Phaseolus vulgaris
Phvul.001G030300 0.5kb upstream 0.5kb upstream 500 false Chr01: 2679946-2680445 Phaseolus vulgaris
Phvul.001G030300 0.5kb downstream 0.5kb downstream 4307 true Chr01: 2680446-2684752 Phaseolus vulgaris
Phvul.001G030300 0.5kb downstream 0.5kb downstream 500 false Chr01: 2684253-2684752 Phaseolus vulgaris
Phvul.001G030300 1.0kb upstream 1.0kb upstream 4807 true Chr01: 2679446-2684252 Phaseolus vulgaris
Phvul.001G030300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2679446-2680445 Phaseolus vulgaris
Phvul.001G030300 1.0kb downstream 1.0kb downstream 4807 true Chr01: 2680446-2685252 Phaseolus vulgaris
Phvul.001G030300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2684253-2685252 Phaseolus vulgaris
Phvul.001G030300 2.0kb upstream 2.0kb upstream 5807 true Chr01: 2678446-2684252 Phaseolus vulgaris
Phvul.001G030300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2678446-2680445 Phaseolus vulgaris
Phvul.001G030300 2.0kb downstream 2.0kb downstream 5807 true Chr01: 2680446-2686252 Phaseolus vulgaris
Phvul.001G030300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2684253-2686252 Phaseolus vulgaris
Phvul.001G030300 5.0kb upstream 5.0kb upstream 8807 true Chr01: 2675446-2684252 Phaseolus vulgaris
Phvul.001G030300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2675446-2680445 Phaseolus vulgaris
Phvul.001G030300 5.0kb downstream 5.0kb downstream 8807 true Chr01: 2680446-2689252 Phaseolus vulgaris
Phvul.001G030300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2684253-2689252 Phaseolus vulgaris
Phvul.001G030300 10.0kb upstream 10.0kb upstream 13807 true Chr01: 2670446-2684252 Phaseolus vulgaris
Phvul.001G030300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2670446-2680445 Phaseolus vulgaris
Phvul.001G030300 10.0kb downstream 10.0kb downstream 13807 true Chr01: 2680446-2694252 Phaseolus vulgaris
Phvul.001G030300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2684253-2694252 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314327 5265 Fabidae View MSA
124068414 5270 Rosid View MSA
123741626 5271 Pentapetalae View MSA
122791529 5272 Eudicot View MSA
122044659 5273 Angiosperm View MSA
121345810 5274 Embryophyte View MSA
123428515 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.5323 0.0 141.519 High High
cufflinks 42.8199 0.0 110.684 High  
cufflinks 33.9644 0.0 87.9061   Low
cufflinks 58.5376 0.0 151.825 High High
cufflinks 35.82 0.0 92.8297 High Low
cufflinks 36.6764 0.0 94.8601 High  
cufflinks 40.0937 0.0 103.654 High  
cufflinks 45.7188 0.0 118.26 High  
cufflinks 43.3972 0.0 112.174 High  
cufflinks 38.1609 0.0 98.6998 High  
cufflinks 44.2689 0.0 114.427 High  

0 Strain