Gene : Phvul.001G030800 P. vulgaris v2.1
Genomic Order:  310 Name:  ? Phvul.001G030800
Secondary Identifier:  ? PAC:37168893
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G030800 0.5kb upstream 0.5kb upstream 1324 true Chr01: 2733283-2734606 Phaseolus vulgaris
Phvul.001G030800 0.5kb upstream 0.5kb upstream 500 false Chr01: 2734107-2734606 Phaseolus vulgaris
Phvul.001G030800 0.5kb downstream 0.5kb downstream 1324 true Chr01: 2732783-2734106 Phaseolus vulgaris
Phvul.001G030800 0.5kb downstream 0.5kb downstream 500 false Chr01: 2732783-2733282 Phaseolus vulgaris
Phvul.001G030800 1.0kb upstream 1.0kb upstream 1824 true Chr01: 2733283-2735106 Phaseolus vulgaris
Phvul.001G030800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2734107-2735106 Phaseolus vulgaris
Phvul.001G030800 1.0kb downstream 1.0kb downstream 1824 true Chr01: 2732283-2734106 Phaseolus vulgaris
Phvul.001G030800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2732283-2733282 Phaseolus vulgaris
Phvul.001G030800 2.0kb upstream 2.0kb upstream 2824 true Chr01: 2733283-2736106 Phaseolus vulgaris
Phvul.001G030800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2734107-2736106 Phaseolus vulgaris
Phvul.001G030800 2.0kb downstream 2.0kb downstream 2824 true Chr01: 2731283-2734106 Phaseolus vulgaris
Phvul.001G030800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2731283-2733282 Phaseolus vulgaris
Phvul.001G030800 5.0kb upstream 5.0kb upstream 5824 true Chr01: 2733283-2739106 Phaseolus vulgaris
Phvul.001G030800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2734107-2739106 Phaseolus vulgaris
Phvul.001G030800 5.0kb downstream 5.0kb downstream 5824 true Chr01: 2728283-2734106 Phaseolus vulgaris
Phvul.001G030800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2728283-2733282 Phaseolus vulgaris
Phvul.001G030800 10.0kb upstream 10.0kb upstream 10824 true Chr01: 2733283-2744106 Phaseolus vulgaris
Phvul.001G030800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2734107-2744106 Phaseolus vulgaris
Phvul.001G030800 10.0kb downstream 10.0kb downstream 10824 true Chr01: 2723283-2734106 Phaseolus vulgaris
Phvul.001G030800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2723283-2733282 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315219 5265 Fabidae View MSA
124070215 5270 Rosid View MSA
123748040 5271 Pentapetalae View MSA
122795474 5272 Eudicot View MSA
122049581 5273 Angiosperm View MSA
121311486 5274 Embryophyte View MSA
123348778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.01852 0.0 22.129    
cufflinks 6.34407 0.0 20.1953    
cufflinks 0.691391 0.0 2.71144   Low
cufflinks 3.54069 0.0 12.0092    
cufflinks 10.6964 0.0 32.2424    
cufflinks 0.917406 0.0 3.53144   Low
cufflinks 13.1468 0.0 38.3996    
cufflinks 5.55702 0.0 17.843    
cufflinks 9.81417 0.0 29.6936    
cufflinks 20.5465 0.0 57.6384   High
cufflinks 8.57074 0.0 26.4742    

0 Strain